Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | COXBURSA331_A0409 |
Symbol | spoT |
ID | 5793302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii RSA 331 |
Kingdom | Bacteria |
Replicon accession | NC_010117 |
Strand | + |
Start bp | 345046 |
End bp | 347169 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641329933 |
Product | guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase |
Protein accession | YP_001596252 |
Protein GI | 161831397 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0259018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGCCTCT TCAAAAAATT ACGTCAAAAG CTCGATTATC TCAATGGCGA GCAAGTCGAA TCCATCCGCC AAGCCTATTT AATGGCCTTC AGTGCTCATC GCGCTCAAAA ACGCCGTACC GGAGAACCTT ACATCAACCA CCCAGTGGCA GTGGCGGGTA TTTTAGCGGA CCTAAAAATG GATTATCAGA CGATTATGGC CGCTTTACTG CACGATGTCA TTGAAGATAC CCCTGTCGAA AAAAAAGCGA TCGCCGAGAA ATTTGGTGAA GAAGTGGCTG AACTAGTGGA CGGGGTCAGC AAATTGACGC AAATTGAATT TGTGAGCCGC GCTGAAGCCC AAGCGGAGAG TTTTCGGAAA ATGGTGTTGG CTATGGCGCG CGATATCCGC GTTATCATCG TCAAATTGGC CGATCGTTTA CATAACATGC GCACGCTTGG CTCATTACAT TCGCAAAAGC GGCGACGAAT TGCACGAGAA ACGTTAGATA TCTTTGCGCC GATCGGAAAA CGCTTAGGCA TGCGGGAATT GTCCGTTGAA TTAGAAGAAC TGGGTTTTGC TGCGCTTTAT CCGTTGCGTC ATCGTGCTTT AAAAGACGCT GTTCGGCGAA CGCGCGGTAA TCGAAAGAAA ATTCTAGCCT TGATTGAAAA AACGCTGCAC GTGGGTTTGA ATCAAAGTCG TTTATCTTCT TACACCATCA CCGGACGAGA AAAGCATTTA TACAGTATTT ATCGCAAAAT GCGAAATAAA CATATCCCGT TTAATGAAAT TATGGATGTG TATGCTTTTC GCGTTATTGT TGAAGACGTT GACTCGTGTT ACCGGGCCTT GGGTATTATT CATGGCTTAT TTAAGCCCGT TCCTGAACGG TTCAAAGATT ATATCGCCAT CCCAAAAGCG AACGGCTATC AGTCATTACA CACCACTTTA TTCGGCCCTT ATGGACTCCC TGTCGAAGTA CAAATCCGTA CAACGGAAAT GGATCGCATG GCAACAAAAG GCATTGCCGC GCACTGGCTT TATAAAACGA CGGATGCGCC CATGACGGAA TCGCAAGTGC GCGCCAAAGC ATGGGTGAAA AATTTATTGG AATTACAGGA GGATGCCGCA AATCCTCTGG AATTTATAGA AAACGTGAAA ATGGATTTAT TCCCCGATGA GGTTTACGTC TTTACCCCCA GAGGTGAAAT TATGGAACTG CCCGCTGGCG CAACGGCGAT AGACTTTGCC TATGCGGTTC ACACCGATGT AGGCAATAAC TGTGTTGCTG TTAAAATTGA CCGGCATTTG GCCCCTCTAT CAACACCCCT CGTGAATGGC CAAACGGTGG AGGTGATTAC TTCTTCCAGT GGTCGTCCGA ATCCTGCGTG GTTAGATTTT GTGGTGACCA GTAAGGCCAG GGGCAGCATT CGTCACTTTT TGAAATCACA GCGACGAACC GAATCCATTG CGTTAGGCAA ACAATTATTG AAAAAAGCGT TGGGAAATTA TTCCCTTTCT TTAAAAAAAT TATCGCAGCC GGTTATCAAT TACACATTGA AAGAAATGCA ATTAAAATTC TTAGATGATT TGTTGGAAGA AATTGGGCTA GGCAATCGAA TGGCTGCATT AGTAGCCCAA CGCATTGCAG CAGTAGCTGA AGAAGCTGAA GCGGAAACCG ACATGAAGCC GGCAGAGAAA GCACCATTAA TTATTAAAGG GACCGAAGGA TTAGTAGTGA ATTTCGCAAC CTGCTGCTAC CCTGTTCCCG GTGATCCCAT CGTAGGTATC ATTGATGTGG GCAAAGGGAT CATCGTTCAT GTGGAACGGT GTCCGTCTAT TGCAAAACTG CGTCGCCACC CGGATCGTTT TATGCCACTT CGATGGTCCG AACAGGTTAG AGCGGAATTT CCAGCATTGG TTCGCGTTCA AGTGGTTAAT GAACGTGGGA CATTGGCTAT GCTAACATTA GCTATTGCGG AAGCCGATGC CAACATTGAG GATATTAAAG TAGAAGAACG CGAGGGATTG CACTATATTG TTACGTTTCG CATTACTGTT CGCGACCGCA AGCATTTAGC CAAAGTGCTG CGACGTTTGC GTCAGGTGAA GCAATTAGTA AGAATTATAC GCCGTTTTGA CTAG
|
Protein sequence | MRLFKKLRQK LDYLNGEQVE SIRQAYLMAF SAHRAQKRRT GEPYINHPVA VAGILADLKM DYQTIMAALL HDVIEDTPVE KKAIAEKFGE EVAELVDGVS KLTQIEFVSR AEAQAESFRK MVLAMARDIR VIIVKLADRL HNMRTLGSLH SQKRRRIARE TLDIFAPIGK RLGMRELSVE LEELGFAALY PLRHRALKDA VRRTRGNRKK ILALIEKTLH VGLNQSRLSS YTITGREKHL YSIYRKMRNK HIPFNEIMDV YAFRVIVEDV DSCYRALGII HGLFKPVPER FKDYIAIPKA NGYQSLHTTL FGPYGLPVEV QIRTTEMDRM ATKGIAAHWL YKTTDAPMTE SQVRAKAWVK NLLELQEDAA NPLEFIENVK MDLFPDEVYV FTPRGEIMEL PAGATAIDFA YAVHTDVGNN CVAVKIDRHL APLSTPLVNG QTVEVITSSS GRPNPAWLDF VVTSKARGSI RHFLKSQRRT ESIALGKQLL KKALGNYSLS LKKLSQPVIN YTLKEMQLKF LDDLLEEIGL GNRMAALVAQ RIAAVAEEAE AETDMKPAEK APLIIKGTEG LVVNFATCCY PVPGDPIVGI IDVGKGIIVH VERCPSIAKL RRHPDRFMPL RWSEQVRAEF PALVRVQVVN ERGTLAMLTL AIAEADANIE DIKVEEREGL HYIVTFRITV RDRKHLAKVL RRLRQVKQLV RIIRRFD
|
| |