| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A0113 |
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| Symbol | dapF |
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| ID | 5793437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Coxiella burnetii RSA 331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010117 |
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| Strand | + |
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| Start bp | 99323 |
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| End bp | 100153 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641329666 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001596002 |
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| Protein GI | 161830776 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase
[TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000000067838 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTA ATTTTACTAA GATGCAGGGA TCGGGTAATG ATTTTGTGGT CATTGATGCC
ACAAAAACCC CTTTTCAATT AACGACATCG CAAATCCAGA AAATGGCGAA TCGGCGGTTT
GGCGTGGGTT TTGATCAATT ATTGGTGATC GAGCCGCCCA AAAATAATTC AGTGGATTTT
CATTTTCGGA TCTTTAATGC CGATGGGAGT GAGGTAGGGC AATGTGGGAA TGGCGCTCGT
TGCATTGCGC GTTTCATCCG TGCTCATCAA TTAAGCGATC GAGAAGAGCT GCGCGTTTCT
ACCCTCAATG AGGTATTAGA ATTGAAAATT CAACCCGATG GTAAAGTATC CGTGAAAATG
GGCGTTCCGC GCTTTGAGCC TACAGAAATT CCTTTTATTG CCTCTGGTGT AGCCAATTTC
TATGACATTG CCGTGGATAA TCAAATAGTA AAGCTAGGTG TAGTCAATAT CGGAAATCCC
CATGCGATAA TTCCGGTGGA GCGCATCAAT GCCGAAGAGG TAGGTAAGCT TGGAGCCCGT
TTAAGTGTGC ATGAGTGTTT TCCGGAAGGC GCCAACGTCG GTTTTATGCA AGTCATCGAT
CCTCAGAATA TTCGACTGCG CGTTTACGAA CGGGGGACGG GTGAAACTTT GGCTTGCGGC
AGTAACGCTT GCGCCGCCGT AGCGGTAGGC CGTCGTTGTG GACTGCTCCA AGAGCGCGTG
GTCGTTAGTC AGCCTGGGGG GAGCCTCACC ATCGATTGGC AAGGACCGCT AACTCCGGTC
ACAATGACAG GACCTGCAAC CACCGTTTTT TGTGGTGAGT GGCTCGATTA G
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| Protein sequence | MKVNFTKMQG SGNDFVVIDA TKTPFQLTTS QIQKMANRRF GVGFDQLLVI EPPKNNSVDF
HFRIFNADGS EVGQCGNGAR CIARFIRAHQ LSDREELRVS TLNEVLELKI QPDGKVSVKM
GVPRFEPTEI PFIASGVANF YDIAVDNQIV KLGVVNIGNP HAIIPVERIN AEEVGKLGAR
LSVHECFPEG ANVGFMQVID PQNIRLRVYE RGTGETLACG SNACAAVAVG RRCGLLQERV
VVSQPGGSLT IDWQGPLTPV TMTGPATTVF CGEWLD
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