| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A0086 |
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| Symbol | topA |
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| ID | 5793169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Coxiella burnetii RSA 331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010117 |
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| Strand | - |
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| Start bp | 79563 |
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| End bp | 81860 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641329641 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001595977 |
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| Protein GI | 161830529 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000043689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAT CTTTAGTCGT GGTCGAATCG CCTGCCAAAG CGAAAACGAT AGAAAAATAT
TTAGGCAAAG ACTTTAAAGT CATGGCCTCC TATGGTCACG TGCGCGATCT TATTCCCAAA
GAAGGCGCCG TCGATCCCGA GGATCATTTT AAAATGCATT ATCAAGCCAT TGAGCGAAAT
ATTCGACACA TGGATGCCAT CGCCAAAGCG CTCAAACCTT GCCATAACTT ATATCTCGCC
ACCGACCCCG ATCGCGAAGG AGAGGCCATT GCGTGGCATG TCAAACAAAT GCTGGAAAGC
CGAAATGGTT TAAAAGACAA AAAATTTTCA CGCGTTGTCT TCCATCAAAT TACTAAAAAA
GCCGTTCAAC ATGCCATTGA AAATCCGCGC GATATTTCCA TGGACCTCGT GAACGCACAA
CAAGCACGAC GCGCATTGGA TTATTTAGTC GGTTTTAATC TGTCGCCGTT GCTGTGGAAA
AAAATTCGTC CCGGTTTATC TGCCGGGCGC GTGCAAAGTC CCGCGCTTCG TTTGATCGTC
GAAAGAGAAA TTGAAATTGA AAATTTTGAA AGTCAGGAAT ATTGGACTAT ACACGCCGAC
TGTCACGCGC AACAACAACC TTTTGACGCG CGTTTAATCG AATTTCAAGG TGAAAAGCTC
GAACAGTTTT CAATTGTCAA TGAAAAACAA GCCCACGAAA CACGTGATGC CATTACACAA
GCCGCCAACG GAAAATTGAC AGTTGCTAAA GTCGTTAAAC GCGAACGAAA ACGAAATCCA
GCGCCCCCTT TTATTACTTC AACCATGCAG CAAGAAGCCG CACGCAAACT CGGTTTTTCT
GCTTCAAAAA CCATGCAAAT CGCTCAACAA TTGTATGAAG GCGTTAATCT CGGTGAAGAA
GGCGCGATGG GTTTAATCAC TTATATGCGA ACCGATTCTG TCACGCTTGC ATCCGAAGCG
TTACAAGAAA TTCGTCAATT AATCGAAGAA AAATACGGCC AAGAAAATGT ACCCGAACAA
ACACGGATTT ATAAAACCAA ATCAAAAAAC GCGCAAGAAG CGCACGAAGC TATTCGTCCT
ACCTCGGCGT TTCGCACTCC CGAAAATTTA AAAAAATATT TAAATAGCGA TCAATTAAAA
CTTTACACAT TAATTTGGAA ACGAACGATC GCCTGTCAAA TGATCGAAGC GACTTTACAT
ACCGTGGCCG TCGATTTAAA GGCTCCCAAT GCGATTTTTC GGGCTAACGG TTCAACCATT
GTAAAACCGG GATTTATCTC GGTTTATCAA GAAACTTTCG ATGACAAGAA AAAAGAAGAA
GAAAGCGATA GCAAAATGCT TCCACCGTTG GAAGAAGGTC AAACCGTTGA CGTTAATGAA
ATTAAAAGCG AGCAACATTT CACTGAGTCT CCACCTCGTT ACACCGAAGC CAGTTTAGTA
AAAGCGCTTG AGGAATACGA CATCGGCCGA CCTTCTACTT ATGCCAGCAT TATTGCGACT
TTGAAAAACC GTAAATACGT CGATGTGGAT AATAAACGTT TTATTGCCAC TGATGTTGGC
CGCATCGTTA ACCGTTTCCT TACGCATTAT TTCACTAAAT ACGTTGATTA TGGATTCACC
GCTAAATTAG AAGACGAACT CGACGACATT GCCCGCGGCG AAAAAACGTG GATTCCCGTT
TTAGAAACCT TTTGGTCACC GTTTAAAAAT TTGGTGGACG TCACAGAAAA AACAGTTAAG
CGTAGCGATG TGACGCAAGA AAAAATTGAT GAAAAATGCC CAAAATGCAG CGCTCAATTA
TCCATTCGGC TAGGTAGGCG CGGACGTTTT ATCGGTTGCA CGGCTTATCC CGATTGTGAT
TATACACGCA ACCTCACTGA AATTGCGGCT GAAGCTCAAG CCGTACTCGA AGGGCGCCAA
TGCCCAGAAT GTCAATCCAA TTTAATTATA AAAATGGGCC GTTATGGAAA ATTTATTGGT
TGTAGTGGTT ATCCTAATTG CAAATACATG GAACCCTTAG AAAAACCAAA AGACACCAAT
GTAACTTGTC CAAAATGTAA AAAAGGCACC ATCCTACAAC GCAAATCTCG TCGCGGCAAA
ATTTTTTATT CCTGCGCCCG GTACCCCGAC TGCGACTACG CTCTTTGGAA CGAACCCGTT
GCCGAAGCTT GCCCCAAATG CGGCTGGCCT ATTTTATCGA TAAAAACAAC AAAAAGTCGC
GGGACAGAAA AAGTATGCCC CCAAAAAAGT TGTAACTTTA TAGAGGCATA CGATGGAGAC
AAACCATCAC TCGATTAA
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| Protein sequence | MVKSLVVVES PAKAKTIEKY LGKDFKVMAS YGHVRDLIPK EGAVDPEDHF KMHYQAIERN
IRHMDAIAKA LKPCHNLYLA TDPDREGEAI AWHVKQMLES RNGLKDKKFS RVVFHQITKK
AVQHAIENPR DISMDLVNAQ QARRALDYLV GFNLSPLLWK KIRPGLSAGR VQSPALRLIV
EREIEIENFE SQEYWTIHAD CHAQQQPFDA RLIEFQGEKL EQFSIVNEKQ AHETRDAITQ
AANGKLTVAK VVKRERKRNP APPFITSTMQ QEAARKLGFS ASKTMQIAQQ LYEGVNLGEE
GAMGLITYMR TDSVTLASEA LQEIRQLIEE KYGQENVPEQ TRIYKTKSKN AQEAHEAIRP
TSAFRTPENL KKYLNSDQLK LYTLIWKRTI ACQMIEATLH TVAVDLKAPN AIFRANGSTI
VKPGFISVYQ ETFDDKKKEE ESDSKMLPPL EEGQTVDVNE IKSEQHFTES PPRYTEASLV
KALEEYDIGR PSTYASIIAT LKNRKYVDVD NKRFIATDVG RIVNRFLTHY FTKYVDYGFT
AKLEDELDDI ARGEKTWIPV LETFWSPFKN LVDVTEKTVK RSDVTQEKID EKCPKCSAQL
SIRLGRRGRF IGCTAYPDCD YTRNLTEIAA EAQAVLEGRQ CPECQSNLII KMGRYGKFIG
CSGYPNCKYM EPLEKPKDTN VTCPKCKKGT ILQRKSRRGK IFYSCARYPD CDYALWNEPV
AEACPKCGWP ILSIKTTKSR GTEKVCPQKS CNFIEAYDGD KPSLD
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