Gene COXBURSA331_A0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCOXBURSA331_A0086 
SymboltopA 
ID5793169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCoxiella burnetii RSA 331 
KingdomBacteria 
Replicon accessionNC_010117 
Strand
Start bp79563 
End bp81860 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content43% 
IMG OID641329641 
ProductDNA topoisomerase I 
Protein accessionYP_001595977 
Protein GI161830529 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID[TIGR01051] DNA topoisomerase I, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.3689e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAAT CTTTAGTCGT GGTCGAATCG CCTGCCAAAG CGAAAACGAT AGAAAAATAT 
TTAGGCAAAG ACTTTAAAGT CATGGCCTCC TATGGTCACG TGCGCGATCT TATTCCCAAA
GAAGGCGCCG TCGATCCCGA GGATCATTTT AAAATGCATT ATCAAGCCAT TGAGCGAAAT
ATTCGACACA TGGATGCCAT CGCCAAAGCG CTCAAACCTT GCCATAACTT ATATCTCGCC
ACCGACCCCG ATCGCGAAGG AGAGGCCATT GCGTGGCATG TCAAACAAAT GCTGGAAAGC
CGAAATGGTT TAAAAGACAA AAAATTTTCA CGCGTTGTCT TCCATCAAAT TACTAAAAAA
GCCGTTCAAC ATGCCATTGA AAATCCGCGC GATATTTCCA TGGACCTCGT GAACGCACAA
CAAGCACGAC GCGCATTGGA TTATTTAGTC GGTTTTAATC TGTCGCCGTT GCTGTGGAAA
AAAATTCGTC CCGGTTTATC TGCCGGGCGC GTGCAAAGTC CCGCGCTTCG TTTGATCGTC
GAAAGAGAAA TTGAAATTGA AAATTTTGAA AGTCAGGAAT ATTGGACTAT ACACGCCGAC
TGTCACGCGC AACAACAACC TTTTGACGCG CGTTTAATCG AATTTCAAGG TGAAAAGCTC
GAACAGTTTT CAATTGTCAA TGAAAAACAA GCCCACGAAA CACGTGATGC CATTACACAA
GCCGCCAACG GAAAATTGAC AGTTGCTAAA GTCGTTAAAC GCGAACGAAA ACGAAATCCA
GCGCCCCCTT TTATTACTTC AACCATGCAG CAAGAAGCCG CACGCAAACT CGGTTTTTCT
GCTTCAAAAA CCATGCAAAT CGCTCAACAA TTGTATGAAG GCGTTAATCT CGGTGAAGAA
GGCGCGATGG GTTTAATCAC TTATATGCGA ACCGATTCTG TCACGCTTGC ATCCGAAGCG
TTACAAGAAA TTCGTCAATT AATCGAAGAA AAATACGGCC AAGAAAATGT ACCCGAACAA
ACACGGATTT ATAAAACCAA ATCAAAAAAC GCGCAAGAAG CGCACGAAGC TATTCGTCCT
ACCTCGGCGT TTCGCACTCC CGAAAATTTA AAAAAATATT TAAATAGCGA TCAATTAAAA
CTTTACACAT TAATTTGGAA ACGAACGATC GCCTGTCAAA TGATCGAAGC GACTTTACAT
ACCGTGGCCG TCGATTTAAA GGCTCCCAAT GCGATTTTTC GGGCTAACGG TTCAACCATT
GTAAAACCGG GATTTATCTC GGTTTATCAA GAAACTTTCG ATGACAAGAA AAAAGAAGAA
GAAAGCGATA GCAAAATGCT TCCACCGTTG GAAGAAGGTC AAACCGTTGA CGTTAATGAA
ATTAAAAGCG AGCAACATTT CACTGAGTCT CCACCTCGTT ACACCGAAGC CAGTTTAGTA
AAAGCGCTTG AGGAATACGA CATCGGCCGA CCTTCTACTT ATGCCAGCAT TATTGCGACT
TTGAAAAACC GTAAATACGT CGATGTGGAT AATAAACGTT TTATTGCCAC TGATGTTGGC
CGCATCGTTA ACCGTTTCCT TACGCATTAT TTCACTAAAT ACGTTGATTA TGGATTCACC
GCTAAATTAG AAGACGAACT CGACGACATT GCCCGCGGCG AAAAAACGTG GATTCCCGTT
TTAGAAACCT TTTGGTCACC GTTTAAAAAT TTGGTGGACG TCACAGAAAA AACAGTTAAG
CGTAGCGATG TGACGCAAGA AAAAATTGAT GAAAAATGCC CAAAATGCAG CGCTCAATTA
TCCATTCGGC TAGGTAGGCG CGGACGTTTT ATCGGTTGCA CGGCTTATCC CGATTGTGAT
TATACACGCA ACCTCACTGA AATTGCGGCT GAAGCTCAAG CCGTACTCGA AGGGCGCCAA
TGCCCAGAAT GTCAATCCAA TTTAATTATA AAAATGGGCC GTTATGGAAA ATTTATTGGT
TGTAGTGGTT ATCCTAATTG CAAATACATG GAACCCTTAG AAAAACCAAA AGACACCAAT
GTAACTTGTC CAAAATGTAA AAAAGGCACC ATCCTACAAC GCAAATCTCG TCGCGGCAAA
ATTTTTTATT CCTGCGCCCG GTACCCCGAC TGCGACTACG CTCTTTGGAA CGAACCCGTT
GCCGAAGCTT GCCCCAAATG CGGCTGGCCT ATTTTATCGA TAAAAACAAC AAAAAGTCGC
GGGACAGAAA AAGTATGCCC CCAAAAAAGT TGTAACTTTA TAGAGGCATA CGATGGAGAC
AAACCATCAC TCGATTAA
 
Protein sequence
MVKSLVVVES PAKAKTIEKY LGKDFKVMAS YGHVRDLIPK EGAVDPEDHF KMHYQAIERN 
IRHMDAIAKA LKPCHNLYLA TDPDREGEAI AWHVKQMLES RNGLKDKKFS RVVFHQITKK
AVQHAIENPR DISMDLVNAQ QARRALDYLV GFNLSPLLWK KIRPGLSAGR VQSPALRLIV
EREIEIENFE SQEYWTIHAD CHAQQQPFDA RLIEFQGEKL EQFSIVNEKQ AHETRDAITQ
AANGKLTVAK VVKRERKRNP APPFITSTMQ QEAARKLGFS ASKTMQIAQQ LYEGVNLGEE
GAMGLITYMR TDSVTLASEA LQEIRQLIEE KYGQENVPEQ TRIYKTKSKN AQEAHEAIRP
TSAFRTPENL KKYLNSDQLK LYTLIWKRTI ACQMIEATLH TVAVDLKAPN AIFRANGSTI
VKPGFISVYQ ETFDDKKKEE ESDSKMLPPL EEGQTVDVNE IKSEQHFTES PPRYTEASLV
KALEEYDIGR PSTYASIIAT LKNRKYVDVD NKRFIATDVG RIVNRFLTHY FTKYVDYGFT
AKLEDELDDI ARGEKTWIPV LETFWSPFKN LVDVTEKTVK RSDVTQEKID EKCPKCSAQL
SIRLGRRGRF IGCTAYPDCD YTRNLTEIAA EAQAVLEGRQ CPECQSNLII KMGRYGKFIG
CSGYPNCKYM EPLEKPKDTN VTCPKCKKGT ILQRKSRRGK IFYSCARYPD CDYALWNEPV
AEACPKCGWP ILSIKTTKSR GTEKVCPQKS CNFIEAYDGD KPSLD