| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_3755 |
|---|
| Symbol | |
|---|
| ID | 5769189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | - |
|---|
| Start bp | 733777 |
|---|
| End bp | 735108 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641318059 |
|---|
| Product | type III secretion system apparatus protein YscQ/HrcQ |
|---|
| Protein accession | YP_001583731 |
|---|
| Protein GI | 161520304 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
|---|
| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00143257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCTC GTAAATCCGC ACCCACCGCG CGACGACACG ACGCGCACGA CTACGGATTC
CGGCGACGCA CGCGCACGGC CGCGTCCCTA CAATCGACGC AGCAGCCGCG CGCGACCTGC
GCCACCGGCC ACAACAACCC GTCGAACTCA CGCCGAATTC GCTCCGATCC CGCCGTGCCT
GCGCTGTTCC TGACGAATGC CGACGACGCC GCGGACCGCG CCGCGCCGTC CGCCGCCACG
ACGCGCGCGA CGCCGCCCGC CGCGGTGCTG CCGCTCGACG CGTCGCCCGC GCTGCCGCGC
CTGTCGGCCG CGGCCGCACG CGGGCTGTCG CACGCATACG GCGCCACCGC CGCCGTGCCG
ATCGCGCTCG GCAACGAGGC GTACGCGGTG CGCTGGCGCG TCGACGCGGA GCCGGCGGCC
GACGCGCACG CCTACCGGTT CGTCGTCGGC CCCGCCACCG GCACGTTGTG GCTCGACCCG
CTCGCGGAAA CCGAATGGCT CGGCGACGCC GCCGATCCGG CCGTCCCGGC CGTGATCCGC
GCGGCGCTGC TCGCCGATCT CGGCGCGCCG CTCGCGGCGA CGCTGCAGGC CGCCACGCGC
CAGCGCGTCG AATTGCTGCC GCCCGCCGAA CCGGCGCCCG CGTGGCACGG GTCGCCGTCC
GCGCTGCGCT TCGAGCTGCG TCGCGCCGAC GGCGCGTGGC GCTGCCACGG CGCCGTGCTG
TTCGATGCGC CGGACGCGCT CGCCGTGTTC TTCGCGTCCG CGCCGGCCGC GCGGCCCGAC
GCACACGCCG CGTACGCGAA CCTGCCGGTG CCGCTCGTGT TCGAAATCGG CCGCACCGAA
TTGACGATGG CCGAGCTCGC GGACGTCGTC GGCGGCGACA TCATCGCGAT CGAGCGCTGG
CACGCGCACG AGCAGAACCT GCTGTGCGTC GGGCGCGTGC CGGCCGCGCC CGCGTGGGAG
ATCACCGGAC GGCCGTCGGG CAGCCGGCTG ACCGTCGAAC GAATCAGGGA GATGCCTTTG
GAACCGACCC GCACCGATAC CCCGCCCGCG ACCGGCGCCG CGCACGACGC ATCGCCGGCC
GATGCGCCGC GCGCGCTCGA CGGCCTCGCG GTCGACCTGC GCTTCGAGCT GCCGCCGACG
TCGATGCCGC TCGGCGAGCT GAGCGCGCTG CAACCCGGCG CCGTGATCGA GCTGCAGCAA
GGGATCAACC AGAGCGTGAT CCATCTCGTC GCCAACGGGA TGCTGATCGG CACCGGCCAT
CTGATCGCGG TTGGCCAAAA GCTCGGCGTG CGCGTCGTCA CGCTGACGCA ACCCGCGCCG
CGCGAGCGCT GA
|
|---|
| Protein sequence | MAPRKSAPTA RRHDAHDYGF RRRTRTAASL QSTQQPRATC ATGHNNPSNS RRIRSDPAVP
ALFLTNADDA ADRAAPSAAT TRATPPAAVL PLDASPALPR LSAAAARGLS HAYGATAAVP
IALGNEAYAV RWRVDAEPAA DAHAYRFVVG PATGTLWLDP LAETEWLGDA ADPAVPAVIR
AALLADLGAP LAATLQAATR QRVELLPPAE PAPAWHGSPS ALRFELRRAD GAWRCHGAVL
FDAPDALAVF FASAPAARPD AHAAYANLPV PLVFEIGRTE LTMAELADVV GGDIIAIERW
HAHEQNLLCV GRVPAAPAWE ITGRPSGSRL TVERIREMPL EPTRTDTPPA TGAAHDASPA
DAPRALDGLA VDLRFELPPT SMPLGELSAL QPGAVIELQQ GINQSVIHLV ANGMLIGTGH
LIAVGQKLGV RVVTLTQPAP RER
|
|---|
| |