| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_3173 |
|---|
| Symbol | |
|---|
| ID | 5769437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | + |
|---|
| Start bp | 16779 |
|---|
| End bp | 17627 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641317471 |
|---|
| Product | squalene synthase HpnD |
|---|
| Protein accession | YP_001583149 |
|---|
| Protein GI | 161519722 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1562] Phytoene/squalene synthetase |
|---|
| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.170379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.798484 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGTTT CCAATCTCGT CGTGGACGAA CAAGAAACCG ACGCCGCTGC CGTCACATCG
GGCAGTTCTT TCTACCTCGC GATGCGCATC CTGCCGGCCG TGCAGCGCGA CGCGATGTTC
CAGGTCTACG CGTTCTGCCG CGCGGTGGAC GACATCGCCG ACAGCGACCT GCCGCGCGCC
GAGCGCGCCG CGGGCCTCGA ACGCTGGCGC GCCGACATCG ACGCGTGCTT CGCCGGCCAT
CCGCCGCGCC ATCTGGTCGC GCTCGAGCGC GAAATCCGCG CATTCGATCT GCAGCGCGAC
GACTTCCACG CGATGATCGA CGGGATGGCG ATGGACGCCG CCGAGGATAT CTGCGCGCCC
GACGAGCCGA CGCTCGACCT CTATTGCGAC CGCGTGGCGA GCGCGGCCGG CCGGCTGTCG
GTGAGGATTT TCGGGATGCC GGAAGCCGAA GGCATCAAGC TGTCGCACCA CCTCGGCCGC
GCGCTGCAAT TGACGAACAT CCTGCGCGAC ATCGACGACG ACGCGGCGAT CAACCGCTGC
TATCTGCCGC GCGAACTGCT GCAGCGCGAA GGGATCGCGA TTTCCGATCC GGCGACGATC
GCGCGCGACC CCGCGTTGCC GCGCGTGTGC GCGACGCTCG TCGAACGCGC GCTCGAACAT
TTCAGGCAGG CCGATGCGGT GATGGACACC TGCGCACGCG CGCAGGTGAA GGCGCCGCGG
ATCATGTCGG GCGCATATCG CTGCATTCTC GAGGCGGCGG TGGCCCGCGG CTTTGCGGCA
CCGCGTGCGC CGCTGCGCAA GCCGAAGGCG CGGATGCTGA TGATCGCCGC GCGCTACGCG
CTGTTCTGA
|
|---|
| Protein sequence | MAVSNLVVDE QETDAAAVTS GSSFYLAMRI LPAVQRDAMF QVYAFCRAVD DIADSDLPRA
ERAAGLERWR ADIDACFAGH PPRHLVALER EIRAFDLQRD DFHAMIDGMA MDAAEDICAP
DEPTLDLYCD RVASAAGRLS VRIFGMPEAE GIKLSHHLGR ALQLTNILRD IDDDAAINRC
YLPRELLQRE GIAISDPATI ARDPALPRVC ATLVERALEH FRQADAVMDT CARAQVKAPR
IMSGAYRCIL EAAVARGFAA PRAPLRKPKA RMLMIAARYA LF
|
|---|
| |