Gene Nmar_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1785 
Symbol 
ID5774665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1630877 
End bp1632025 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content33% 
IMG OID641317441 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001583119 
Protein GI161529293 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAGATA TTCCACACGT TGTAATTTTA GGAGGAGGTT TTGGTGGACT TGCTACTGCA 
AATGAGATTA GAAACTCATT GTCATCTTCA CAGGTCAAAA TCACAATTAT TGATAAAAAA
GACTGGTTTA TGGTGGGATT TGCAAAATTA TGGATAATAA ATGGAACACG AACATTTGAA
AATTCTATTG GTCACCTAAA TCAGTTAGAA AAAAAAGAAA TCAACTTCAT ACAAGATGAG
ATACTGTCAA TTGATCTTCA AAACAAAAAT GTCAAGACTA AACAAGAAGA CATCTCTTAT
GATTTTCTTG TAATATCATT AGGTGCAGTT TTAGCTCCAC AAAAAATTCC TGGATTAACA
GAAAATGGGT TCAATCTATA TGATCACAAT CAACTTTCAG AAATTCACAA CAAACTCCAA
AATATTGATT CTGGAAAAAT TGCCATTTCT ATAATGGGAA TGCCGTACAA ATGTCCTCCA
GCACCATTTG AGGCCAGTTT ATTGATAGAT TCCATGCTCA GAAAACGTGG AGTGCGTGAT
TCTGTTCAAA TTGACTTTTA CAGCCCAGCT CCAATTACAT TACCTGCAGC TGGCCCAGAA
GTTAGCAAAA AAATTCTTGA GTTAGTGAAC TCTGAAAAAA TTACTTTTCA CAATTCATCT
AAAATAAAAT CAGTTGAATC AAACAAATTA ATTTTTGAAA ATGGCGAAGC TGAATTTGAT
TTACTTTTAG CTGTTCCACC TCATATTGCA CCAAAAGTAA TCTATGATTC TGGATTGGCT
AAAGAATCTG GATTTATTCA AATAGATAGA GATTGTAAAA CTCCATTTGA AGATGTATTT
GCAGTTGGTG ATGTTACCAG TTTAGTAGTC ACAGAAAATA AAGCAGTACC AAAAGCTGGA
ATTTTTGCAG AAGGTGAGGG TATAACTGTT GCAAAAAATA TTGTATCAAA ACTTCAATCA
AAAGAAGAAT CTGAATTATT TGATGGAAAG GGAGGATGTT TTATTGAATC AGGACGAGAA
ACAGCATCAA TTATTGAAGT TGATATGTTT TCACAACCAG AACCTTCTAC TAGTATTTCT
GAACAAACTT CTGAAAATCT TTCAAGTAAA TTAGAATTTG AAAAAGACAG ACTTTCCAAA
TGGCTTTAA
 
Protein sequence
MTDIPHVVIL GGGFGGLATA NEIRNSLSSS QVKITIIDKK DWFMVGFAKL WIINGTRTFE 
NSIGHLNQLE KKEINFIQDE ILSIDLQNKN VKTKQEDISY DFLVISLGAV LAPQKIPGLT
ENGFNLYDHN QLSEIHNKLQ NIDSGKIAIS IMGMPYKCPP APFEASLLID SMLRKRGVRD
SVQIDFYSPA PITLPAAGPE VSKKILELVN SEKITFHNSS KIKSVESNKL IFENGEAEFD
LLLAVPPHIA PKVIYDSGLA KESGFIQIDR DCKTPFEDVF AVGDVTSLVV TENKAVPKAG
IFAEGEGITV AKNIVSKLQS KEESELFDGK GGCFIESGRE TASIIEVDMF SQPEPSTSIS
EQTSENLSSK LEFEKDRLSK WL