Gene Nmar_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1760 
Symbol 
ID5774642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1608424 
End bp1608933 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content34% 
IMG OID641317415 
Productdual specificity protein phosphatase 
Protein accessionYP_001583094 
Protein GI161529268 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAT CTCACATGAG CAAGCCTGGT AATCTCTGGA GAAAAGTTCA TGGAAAGATT 
ACAAAAAAAC CAACAAACTT TTCCTGGCTG ATTGAAGAAA AATTAGCAGG CTCTGGTATG
CCTACAAGTT TTGATGAATT TGATTGGATT GTAAACCAAG GCGTAAAATC AATTGTTACC
ATGACTGAAA ATTCTTTACC CGATAATTGG GTACAAAATA TTGGATATCT TCATGTACCA
ACACCTGATT TTACAGCACC TGATATGGAA AATATAGACT CTGCAGTTGA TTTTATACAT
GAGCAAATCA CAAATGATCA TGCAGTGATG GTTCATTGTG CAGCTGGTAT GGGAAGAGCT
GGAACAATAC TTGCATGTTA TTTTGTAAAA TACAAAAAAT TCACTGCAGA AGATGCTATC
AAAAAAATTC GTGAAGAAAG ACCAGGTTCG ATTCAATCTG AAGTACAAGA ACTAGCTATC
GGTTTTTATG AAAAACATGT AAAAAATTAA
 
Protein sequence
MLTSHMSKPG NLWRKVHGKI TKKPTNFSWL IEEKLAGSGM PTSFDEFDWI VNQGVKSIVT 
MTENSLPDNW VQNIGYLHVP TPDFTAPDME NIDSAVDFIH EQITNDHAVM VHCAAGMGRA
GTILACYFVK YKKFTAEDAI KKIREERPGS IQSEVQELAI GFYEKHVKN