Gene Nmar_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1740 
Symbol 
ID5773982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1594446 
End bp1594922 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content38% 
IMG OID641317395 
Productpeptidylprolyl isomerase 
Protein accessionYP_001583074 
Protein GI161529248 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAG CAAATATTGA AACAAATTTT GGAAAAATTT CGTTTAAGCT TCTACCAGAT 
TTGGCTCCTG AGACAGTAAG AAACTTTGAA AAATTAGCCA AAGATGGATT CTATGATGGA
ACATTATTTC ACAGAGTAAT ACCAGGATTT ATGATTCAAG GTGGAGACCC AAATACAAAA
ACAGATAACA AAAGTTCATG GGGTACAGGC GGTCCTGGAT ACAATGTAAA AGCAGAATTC
AATTCGAGAT CTCATTTACG TGGAATTGTT TCAATGGCTA GAGCACAAGA TCCAGATAGT
GCAGGCTCAC AATTCTTCAT AGTTACAGCT GACAGTACAT TCCTAGATAG ACAGTATACT
GTATTTGGAG AGGTCACTGA AGGCATGGAT GTAGCAGACA AAATTGTAAA TCTCGAGAGA
GACGGCAACG ATTGTCCTTT GGAAAAAGCA CAGATGACTC GTGTAACTGT GGAATAA
 
Protein sequence
MTTANIETNF GKISFKLLPD LAPETVRNFE KLAKDGFYDG TLFHRVIPGF MIQGGDPNTK 
TDNKSSWGTG GPGYNVKAEF NSRSHLRGIV SMARAQDPDS AGSQFFIVTA DSTFLDRQYT
VFGEVTEGMD VADKIVNLER DGNDCPLEKA QMTRVTVE