| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1730 |
|---|
| Symbol | |
|---|
| ID | 5773731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1586903 |
|---|
| End bp | 1587649 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641317384 |
|---|
| Product | peptidylprolyl isomerase FKBP-type |
|---|
| Protein accession | YP_001583064 |
|---|
| Protein GI | 161529238 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0756023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTTTCG ATAAAGGTTC ACTAATCCTA GTTGATTATA CAGCTAAGGT CAAAGATAGT
GAAGAAGTAT TTGATACAAC TCTCGAAGAG GATGCAAAAA AATATTCTAT TCATGAGCAA
AATGTCAAGT ATCAGCCAAA ACTAGTTTCA ATTGGCGAAG TTTCATATCC AGTTCTAAAA
GGGCTTGATG AGGCTCTTGC AAAAACAGCT GTAGGTGACA AACTTACAGT TGAAGTTACA
CCTGAGAAAG GATTTGGTGA AAGAGATTCT GGTAAAGTCA GAATGATTCC AATTAGAAAA
CTAGGTGAAG ATGCAGAAAA AGTTTCAGTT GGTGATACTA TTGAAGTTGA TAATAAACGT
GGAATAATTC GTTTTATTGG TTCAGGAAGA GTTCAGATTG ATTATAATCA CAGATATGCA
GGAAAAACAA TTCTTTTTGA TGTAAATGTT CTCAAATCAC TTGATTCTCC AAATGATAAA
GTTGATGGAA TTCTAAAAAA TAGACTTCCA GTAGAGGACT CAAAAATTTC ATTTGATTTG
AAAGATAAAG AAGTAAGCAT AACCATTCCT GAAGAAATTC TTCGTGCAGA TGGTTTACAA
ATTATGAAGC ACTTTATTCA ATTAGACATC TTCAAATTTG TTCCTACTTT GGAAAAAGTA
AACTTTGTTG AAACTCATGT TAACAAACAA ACTAAAGAAA AGAAACCTGA AACAAAAGAA
AAAGCACCTG AACAAAAGGC TGCTTAA
|
|---|
| Protein sequence | MTFDKGSLIL VDYTAKVKDS EEVFDTTLEE DAKKYSIHEQ NVKYQPKLVS IGEVSYPVLK
GLDEALAKTA VGDKLTVEVT PEKGFGERDS GKVRMIPIRK LGEDAEKVSV GDTIEVDNKR
GIIRFIGSGR VQIDYNHRYA GKTILFDVNV LKSLDSPNDK VDGILKNRLP VEDSKISFDL
KDKEVSITIP EEILRADGLQ IMKHFIQLDI FKFVPTLEKV NFVETHVNKQ TKEKKPETKE
KAPEQKAA
|
|---|
| |