| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1728 |
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| Symbol | |
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| ID | 5774426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1585127 |
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| End bp | 1585759 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641317382 |
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| Product | proteasome endopeptidase complex |
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| Protein accession | YP_001583062 |
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| Protein GI | 161529236 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0560482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCAAATA ATGTCGAAGA AAAAATTCTG CACGGGACAA CCACTGTAGG TATCAAGGCA
AAAGACGGTG TCGTTTTATG TGCAGATATG AGAGCAAGTG CTGGATACTT TATTGCAAAC
AATAACACCA TGAAAATTCA AAAAATTGAT GACCATGCAG GGTTAACTCT TGCTGGTGGT
GTTGCAGACG CCCAAAACAT TGTTGATATT TTACGTTATC ATTCTAATCT TCATAGAGTT
GAAAAACATG GACCAATCTC AATCCATTCA CTTGCAAGAC TTTGTTCATT AATCTTCCAT
CAAAATAGAG GCTATCCATT TATGGCTGAT ATCTTAGTTG GCGGTTATGA TGCAGAAGGC
CCTGCATTGT TTAACATTGA CATGTTTGGC TCTGTTGAAA AGAAAGCATA TGTTACAACT
GGTAGCGGTT CACCAGTGGC CTATGGTCTA CTTGAAGAAG AATACAGAGA AGATCTTACA
GTTGAAGAAG CAAAAAAAAT TGCTTTACGA GCTGTAAAAG CAGCAATAGT TAGAAACATT
GGTACCGGCG ATGGAATTAA CATCGCAATT ATGGATAAAG ACGGATTCCG TCTTTTGACT
GAAGAACAAA AGAAAGCAGT CATTGAACTT TAG
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| Protein sequence | MSNNVEEKIL HGTTTVGIKA KDGVVLCADM RASAGYFIAN NNTMKIQKID DHAGLTLAGG
VADAQNIVDI LRYHSNLHRV EKHGPISIHS LARLCSLIFH QNRGYPFMAD ILVGGYDAEG
PALFNIDMFG SVEKKAYVTT GSGSPVAYGL LEEEYREDLT VEEAKKIALR AVKAAIVRNI
GTGDGINIAI MDKDGFRLLT EEQKKAVIEL
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