| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1727 |
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| Symbol | |
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| ID | 5773337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1583179 |
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| End bp | 1585119 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641317381 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001583061 |
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| Protein GI | 161529235 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
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| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0637994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAA AACAACAACA AAAAGAATTA CCTCCTAGCA GCCAGAATAT AATGGCCACC
ATACTGCAAA GTATACCTAA AGAAGCTAAT GTTACAAAAA TTGAGTACGA AGGACCACGA
ATTGCACTTT ACACAAACGC TCCTCGTTAT CTAATGGAAA ATAATGAAAC GATTTCAAAT
CTTGTAAGTG TAATCAAAAA ACGAATCGTT GTTAGAACTG ATGAATCAAT TAGAAAACCT
GAAGATGATG CCCGAAAAAT TATTGCAAGT TTGGTTCCAG AAGATGCAAA ATTACAGAAT
ACTCTATTTG ATACTGCAAC AGGTGAAGTT TCAATTGAAG CAAAACGACC TTGGTTATTA
CAAAGAAATG CAAAAGAATT CAATCATGCT GAAGTAACTG AAAAAACAGG CTGGAAAATA
CGTGTAAGAA AGGCTACAAC TGTCCCTTCC CGTACTATTC AAACAATCAA TGCAACTCTC
AAACAAGCCT CTACTGAAAG AAGTAAACAA CTAAAACAAG TTGGAGATGA AATTTTCAGA
CCTAGATTAA CCCAAAGAAC AGAAGTTTCA CTTTATACAC TTGGTGGATT TGGTCAAGTT
GGACGATCTT CATTATTGCT GTCTACTCCT GAAAGTAAGA TACTCATTGA TTGTGGAATA
AATCCTGGAG CACGTTCTCC AATGGATGCA TTTCCTAGAT TGGACTCTTT GAATCTCACA
CTAGATGATC TTGATGCTGT AGTTATTGGT CATGCACACT TGGATCATAC TGGATTTTTG
CCTACATTGT GTAAATATGG ATACAAAGGA CCAATCTATT GTACCGAACC AACACTACCT
ATGATGAATC TTATTCAGTT AGATGCAATC AAAGTTGCAG CAGCTCAAGG AAGAACTCCA
ATCTATTCTG AACGTGATGT CAAACAAATT ATGAGACAAA CAATTACTTT GCCATATGGA
ACTGTAACTG ATATTTCTCC TGACATTAAA TTAGTTCTTG CAAATGCAGG TCACATTCTT
GGTTCTGCAT TATGTCACTT TCATATTGGA AATGGTGATC ACAACTTTGT TTATTCTGGT
GATATCAAAT TTGGAAAAAG CATTTTGTTT GAAGCTGCTA GTTGGAATTT CCCTAGAGTA
GAGACATTAC TCATAGAAAG TACGTATGGT CTTAAAGAAG ACATTCAACC TAGTAGACAG
GAAGTTGAGT CTGCTTTCAT TAATGCTGTA AATAACACTC TTGCAGATGG CGGCAAAGTT
TTAATCCCTA TTCCAGCAGT TGGTCGTGCA CAAGAAATCA TGATGGTAAT TGATCATTAT
ATGAAGTCTG GTGAGATGAT TGAGGCTCCA GTATTTACTG AAGGAATGAT TTCTGAAGCT
TCTGCAATCC ATGAATCATA TCCTGAATAT CTTGCACGTG AACTAAAACA AAAAATTCTT
GAAACTGATG ATAATCCATT TGATTCTGAA TATTTCACAA ATATTGAGCA CGCAGATGCT
AGAGAAGAAC CAATGAGAGA AGACTCCCCT TGTATAATCT TGGCAACATC TGGAATGCTA
GAAGGTGGAC CTGTTTTAGA ATATTTCAAA AATATTGCAC CTGATAAAAA GAGCAAAGTT
CTCTTTGTGT CTTATCAAGT AAACGGAACT TTGGGAAGAA GAGTACTTGA TGGTTCTAAA
CAAGCAACAA TGTTAGGAAA AGATGGTAAG GTTGAAGTTG TAACGATCAA CTGTGGAGTA
GAGAAGCTAG ATGGATTTAG TGGACATAGT GATTACAACC AACTAATGTC CTTTGTACAA
AGACTAAGAC CAAAATTACG AAGAGTCCTA GTTAACCATG GTGAACGAAA GAAATCAGAA
AATCTTGCTA TGAATATTAG AAGAATGCAT AGAGTTCCTG CTCATTATCC TCAAATTCAA
GAAGCAATAA AATTATTTTA G
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| Protein sequence | MQRKQQQKEL PPSSQNIMAT ILQSIPKEAN VTKIEYEGPR IALYTNAPRY LMENNETISN
LVSVIKKRIV VRTDESIRKP EDDARKIIAS LVPEDAKLQN TLFDTATGEV SIEAKRPWLL
QRNAKEFNHA EVTEKTGWKI RVRKATTVPS RTIQTINATL KQASTERSKQ LKQVGDEIFR
PRLTQRTEVS LYTLGGFGQV GRSSLLLSTP ESKILIDCGI NPGARSPMDA FPRLDSLNLT
LDDLDAVVIG HAHLDHTGFL PTLCKYGYKG PIYCTEPTLP MMNLIQLDAI KVAAAQGRTP
IYSERDVKQI MRQTITLPYG TVTDISPDIK LVLANAGHIL GSALCHFHIG NGDHNFVYSG
DIKFGKSILF EAASWNFPRV ETLLIESTYG LKEDIQPSRQ EVESAFINAV NNTLADGGKV
LIPIPAVGRA QEIMMVIDHY MKSGEMIEAP VFTEGMISEA SAIHESYPEY LARELKQKIL
ETDDNPFDSE YFTNIEHADA REEPMREDSP CIILATSGML EGGPVLEYFK NIAPDKKSKV
LFVSYQVNGT LGRRVLDGSK QATMLGKDGK VEVVTINCGV EKLDGFSGHS DYNQLMSFVQ
RLRPKLRRVL VNHGERKKSE NLAMNIRRMH RVPAHYPQIQ EAIKLF
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