Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1725 |
Symbol | |
ID | 5774755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1581822 |
End bp | 1582835 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641317379 |
Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
Protein accession | YP_001583059 |
Protein GI | 161529233 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0282763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGAAG AAAAAGAGAA GAAAAAAGTT GTTGCATTAT TGTCTGGAGG TCTAGACAGT CAGCTTGCTG TTAGAATGAT GCAAGAGCAA GGATTTGATG TCTCTGCAGT TGCAATAAAG ACTCCATTTT GTGATTTTGA TTGTGGAAGA GGTTGTGGAT TTGAAATTAG AGAGAGAGCA GATGATCTTA ATGTAAATTT GAAGACAGTA TATCTTGGTG ATGAATATAT CGAGATGCTA AAAAATCCAA AACACGGAAT CGGTGCTGGA TTTAATCCAT GTATTGATTG CAGAGCTATG ATGTTTGATG CTGCAAAAAA ACACATGGAA GAGATCGGAG CAGAATTTAT TGTATCAGGA GAAGTGTTAG GGCAACGCCC AATGAGTCAA CATAGACCTG CATTAAGAAC TATTGAAAAA GAATCAGATC TTGTAGGAAA AATTGTTAGA CCATTATCTG CTGCATTGTT ACCAGAAACA ATTCCTGAAA AAGAAGGATT GATCAAAAGA GAAAATCTTG GAATGATAAG AGGTAGAACA AGAAGGAACC AATTAGACAT GGCAAAACAA TATGGAATTG AAAACCCTCC CAATGCAGGA GGAGGTTGTT TGTTAACAGA ACCACAATTT GGAATTAAAG CTAAAGATCT TTTTAATCAT GTTGAAAATC CAACAATCAA CGATATTGAT TTGTTAAAAA TTGGAAGGCA TTTCAGATTA GACGAAGAAA CAAAATTTGT TGTTGGTAGA AACAAAGATG AAAATGAAAT GATCAAAGCA ATAGCATTAC CAAATGATAT TTTACTTGAA GCAAAAGATC ATGTTGGACC AACATCAATT CTAAGAGGTA AAAATGCAAA AGATCATACA AAATTTGCAG CAGCTGTAAC TCTAAGATAT TCAGATGCTC CAAAAAACCA ATCAGAAATT GTTTTGGTAA AAAATGGAGA CGATAGTGAA GAAATTAGTG CTAAAAGCAT AGAAGAAGAA GATTACATAA AATTTAGAAT TTAG
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Protein sequence | MTEEKEKKKV VALLSGGLDS QLAVRMMQEQ GFDVSAVAIK TPFCDFDCGR GCGFEIRERA DDLNVNLKTV YLGDEYIEML KNPKHGIGAG FNPCIDCRAM MFDAAKKHME EIGAEFIVSG EVLGQRPMSQ HRPALRTIEK ESDLVGKIVR PLSAALLPET IPEKEGLIKR ENLGMIRGRT RRNQLDMAKQ YGIENPPNAG GGCLLTEPQF GIKAKDLFNH VENPTINDID LLKIGRHFRL DEETKFVVGR NKDENEMIKA IALPNDILLE AKDHVGPTSI LRGKNAKDHT KFAAAVTLRY SDAPKNQSEI VLVKNGDDSE EISAKSIEEE DYIKFRI
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