Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1686 |
Symbol | |
ID | 5774383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1546135 |
End bp | 1547064 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641317340 |
Product | aspartate carbamoyltransferase |
Protein accession | YP_001583020 |
Protein GI | 161529194 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.467419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGT TCTACCAAAA AGACATAATC TCAATTAAGG ATTTTAGCAA GGATCAACTT GAACAAATCT TTCAATCAAC TGATAAAATC ATCTCACTTG ACCCAATTGA CAGAAGGGAG ATTTGTAAGG GCAAAACTTT AGGATATTTG TTTTATGAAC CAAGTACTAG AACTAGACTA AGTTTTGAAG CTGCGATGGC ATCAATTGGA GGCAATTCTT TAGGAATCTC TGATATCACC TCATCTTCAA CTCAAAAAGG AGAGAGTCTT GCAGACACAG TTAGAATCAT CTCCATCTAT TCTGATGCTA TGGTTTTACG ACACCCTCTT GATGGTTCTA GTAGATTTGC AGCTGAAGTT TCAGACAAAC CCGTAATCAA TGCTGGTAGT GGAACAGAAG AGCATCCAAC ACAAGCAATT CAAGACTTGT ACACAATTAA AAAAGAAAAG AAAAAGATTG ACAGATTAAA GATTGGAATT GTTGGTGACC TAAAATATGG AAGAACTGTT TACTCACTTT TGCATGGACT AGGAAACTAT GATGTTGATG TTAGATTAAT TTCCCCTGAA TCATTACGAA TTAGATCAGA CTCTACTTAT GAAATCAAAC AAAAATTAGA TTATACTGAA TCAACTAACA TTGAAGACCA CATTGATGAA TTAGATGTTC TATATGTTAC AAGAATCCAA AAAGAGAGAT TCCCTGATGA GGAAGAATAT CTCAAAGTAA AGGGAAGCTA TGTTGTCGGA TTGGATTTGC TAAAACAAAT GAAAGATGAT AGCATAATTT TGCATCCTCT TCCAAGAATT GATGAAATCT CAACTGATGT TGACAAAACA AAAAATGCAA AATATTTCGA GCAAGCCGAA TATGGAAAGT ACACTCGAGC TGCATTATTG GGCTTGACAC TAAATGAGAA TGGATTCTAG
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Protein sequence | MNEFYQKDII SIKDFSKDQL EQIFQSTDKI ISLDPIDRRE ICKGKTLGYL FYEPSTRTRL SFEAAMASIG GNSLGISDIT SSSTQKGESL ADTVRIISIY SDAMVLRHPL DGSSRFAAEV SDKPVINAGS GTEEHPTQAI QDLYTIKKEK KKIDRLKIGI VGDLKYGRTV YSLLHGLGNY DVDVRLISPE SLRIRSDSTY EIKQKLDYTE STNIEDHIDE LDVLYVTRIQ KERFPDEEEY LKVKGSYVVG LDLLKQMKDD SIILHPLPRI DEISTDVDKT KNAKYFEQAE YGKYTRAALL GLTLNENGF
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