Gene Nmar_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1681 
Symbol 
ID5774500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1541870 
End bp1542235 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content36% 
IMG OID641317335 
Producthypothetical protein 
Protein accessionYP_001583015 
Protein GI161529189 
COG category[S] Function unknown 
COG ID[COG1742] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC AATCAAAGAA TTTTTTTACT TCGATTCTGT TATTTTTTCT AGCCGGTCTT 
TGTGAGATTG GCGGAGGATA TTTGGTATGG CTCTGGATTC GTGAAGATTT TGGTTTTGTA
TTAGGAGCAG TTGGTGGTTT TGTATTATTT TTGTATGGAA TAGTTCCAAC ATTTCAGAAA
ACTCACTTTC ATAGAATCTA TGCAGCTTAT GGAGGAGTCT TTATTGTAAT GTCAGTGTTT
TGGGGTTGGT TAATTGACGG TGTACAACCT GACAACTATG ACATCATTGG GACAATAATT
GCAGTAATTG GAGTCTTGAT GATTTTCTAC TATCCAAGAA AAGGAGAAAA GATTTGGTTG
AAGTAG
 
Protein sequence
MSEQSKNFFT SILLFFLAGL CEIGGGYLVW LWIREDFGFV LGAVGGFVLF LYGIVPTFQK 
THFHRIYAAY GGVFIVMSVF WGWLIDGVQP DNYDIIGTII AVIGVLMIFY YPRKGEKIWL
K