Gene Nmar_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1610 
Symbol 
ID5774554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1469218 
End bp1469775 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content33% 
IMG OID641317263 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001582944 
Protein GI161529118 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTG CATCATTAAG ACGTGATCAT GAGTTAATTG AAAAAGTTGT CAAAGCAATG 
GATGCTACAA TTCAATTATT AAATGAAAAT AAACAAATTC CTGAATCTAT CTTACTTCCT
GTTATTGATT TTTCAAAAAA CTTTACAGAT GTTTGTCATC ACAGTAAAGA AGAGAATTCT
TTGTTTCCTG CATTAGAACA AGCTGGATTG CCAAAAAATA TGGGTCCTAT CGCAATGATG
TTAATAGATC ATGAACGTTC TCGAGAAATT GCATCTAACA TGGAAGCTTC TGCAAAAGAA
TATCTTTCTT CAGGTGAATC TGCAAAATTA ATTTCTGATA TGAAACAATA TGTGGAACAT
ATTACTGAAC ATCTTTGGAA AGAAAATAAT CGATTGTTTA TGATGGCAGA AGCTAGATTG
CAATATGTTG CACAGAAGGT TGATGGGGAA TTAAATGAAA TTGAAGCTGC CAAACTCAAA
GATTTAGGAA AATCCAGGCA ACACTATGAA GATCTTGCTG AAAATCTCAC ACGAGATGTT
GCTGAACAAG GAAAGTAG
 
Protein sequence
MSTASLRRDH ELIEKVVKAM DATIQLLNEN KQIPESILLP VIDFSKNFTD VCHHSKEENS 
LFPALEQAGL PKNMGPIAMM LIDHERSREI ASNMEASAKE YLSSGESAKL ISDMKQYVEH
ITEHLWKENN RLFMMAEARL QYVAQKVDGE LNEIEAAKLK DLGKSRQHYE DLAENLTRDV
AEQGK