| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1577 |
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| Symbol | |
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| ID | 5773449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1443189 |
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| End bp | 1444811 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641317230 |
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| Product | thermosome |
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| Protein accession | YP_001582911 |
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| Protein GI | 161529085 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCAA TTCAACAAGG ACCAAATGGA CCTGTTTTAG TGCTCAAAGA GAGTGCATTA
CAACAAAAAG GTAAAGACGC TCAACAAAAC AACATTGCAG CCGCAAAATT AGTTACAGAA
TTAGTCAAAA GCAGCCTTGG CCCACGTGGT CTAGATAAAA TGTTAGTTGA TTCCTTAGGT
GATGTTACTA TTACAAATGA TGGGGCAACA ATTCTCAAAG AAATTGATGT TCAGCATCCT
GCAGCCAAAA TGATGGTTGA AATTTCAAAA ACTGTTGACA ATGAAGTTGG AGATGGTACA
ACTTCTTCTG TAGTTTTTGG AGGTACTCTT TTGGCTAAAG CCGAAGACCT ACTCAAAAAA
GATGTTCATT CTTCAACAAT TATTGACGGT TATCAAGCTG CTGCAGAAAA AACCCTTGAA
ATCTATTCTG AATTATCAAA GAAAATTAAA CCAGATGACA AAGAATCACT CATTAAAATT
GCTACAACAA GTATGCAATC AAAATTAATC TCAGAAGATA GTGATACATT ATCAAAAATT
GTAGTTGATG CTATTCTTAG CATAGTTACA AAGAAAGGTG AAGATTACTT TGTTGATCTT
GAAAACATAA AAGTTGAAAA GAAATCAGGT GGATCAATTC AAGATACTCA AATTGTTAAA
GGAATTGTTT TAGATAAAGA AATTGTTCAC AGTGGAATGC CTACAAAAAT CGATAAAGCA
AACATTGCTT TGTTAAATTC CGCACTTGAA ATTGAAAAAA CTGAAATGAG TTCTGAAATT
AGAATTTCTG ATCCTACTCA AATGCAGATG TTCTTAGAAG AGGAAAACAG AATGCTCAAG
ACAATGGTTG ACAAACTACA TGATATTGGA GTTAATGTTC TAATTTGCCA AAAAGGTATT
GATGATATTG CACAACATTA TCTTGCCAAA AACGGAATTC TTGCAGTACG TCGTGTAAAA
GAAAGTGATA TGATTAAACT ATCAAAAGCA ACTGGCGGCC GTGTAATTAG TAATATTGAT
GACCTATCTG AAAAAGATCT TGGTTCTGCT AATTTGGTTC ACCAAAAGAA AGTTGAATCT
GACAAATGGG TATTCATTGA AGGATGTAAA CACCCACAAT CAGTTACAAT GTTGATTCGT
GGTGGCTCTC AAAGAGTAAT TGATGAGGTT GACCGCTCTA TTCATGATTC TCTCATGGTA
GTAAAAGACG TAATTGAAAA GCCTGAAATT GTCGCAGGTG GAGGTGCTCC AGAATCATTT
GCAGCATCAC AACTCAAAGA CTGGGCTGAC AATTTTGATG GACGAGAACA ACTTGCAATT
AAGAAATATG CTGAAGCCTT AGAGGTAATT CCATTAACAA TTGCTGAAAA TGCAGGAATG
GATCCAATTG ACACAATGGC AAACTTGAGA GCAAAACAAA ACCAAGGTCG TAAATGGACT
GGTATTGATG CTAAAAACAC AAAGATTGCA GATATGCTTT CTATTGATGT TGTAGAACCA
ATTGCTGTCA AAGAACAGAT TATCAAATCT GCAACAGAAG CTGCATGTAT GATTCTTAGA
ATTGATGATG TCATTGCAGT ATCTGGTGGT CCAGGTGGCG GTGGCATGCC TCCAATGGGA
TAA
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| Protein sequence | MASIQQGPNG PVLVLKESAL QQKGKDAQQN NIAAAKLVTE LVKSSLGPRG LDKMLVDSLG
DVTITNDGAT ILKEIDVQHP AAKMMVEISK TVDNEVGDGT TSSVVFGGTL LAKAEDLLKK
DVHSSTIIDG YQAAAEKTLE IYSELSKKIK PDDKESLIKI ATTSMQSKLI SEDSDTLSKI
VVDAILSIVT KKGEDYFVDL ENIKVEKKSG GSIQDTQIVK GIVLDKEIVH SGMPTKIDKA
NIALLNSALE IEKTEMSSEI RISDPTQMQM FLEEENRMLK TMVDKLHDIG VNVLICQKGI
DDIAQHYLAK NGILAVRRVK ESDMIKLSKA TGGRVISNID DLSEKDLGSA NLVHQKKVES
DKWVFIEGCK HPQSVTMLIR GGSQRVIDEV DRSIHDSLMV VKDVIEKPEI VAGGGAPESF
AASQLKDWAD NFDGREQLAI KKYAEALEVI PLTIAENAGM DPIDTMANLR AKQNQGRKWT
GIDAKNTKIA DMLSIDVVEP IAVKEQIIKS ATEAACMILR IDDVIAVSGG PGGGGMPPMG
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