| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1535 |
|---|
| Symbol | |
|---|
| ID | 5773384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1398567 |
|---|
| End bp | 1399115 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 641317186 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582869 |
|---|
| Protein GI | 161529043 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00000324826 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATAG TAATTACAGG AACGCCAGGT GTTGGAAAAC ACACTATTGG GAAAGAGTTA
GCACAGAAAT TAAAATTAGA AATAGTAGAT ATTAACGAGA TTGCAAAAAA TTCAGGATTA
TTTGAGGAAA ATGACGAATC AAATGATGTG GATACAGAAA AACTCAAAGT AATTCTTAGA
GAAAAAATTT CTGATAGACA TATCATCATT GGGCATTTAG CACCTTACGT TTTAGATAAT
GAAAAAGTCA ATAGAGTTAT TGTTTTGAGA CGAAATCCAT ATGATTTGAT TCAAGTATAT
GATGAAAGAG GTTATTCAGA TAAGAAAAGT AGAGAAAATG CAAGTAGTGA AATTTTAGGT
GTCATTACAT ATGATGTCAT AAACCAATTC CAAGACAAAG TTGTTCAGAT TAATGTGACG
GGAGGAAAGG TACAAGAGGT TTTGGAGAAA GTAAACTCAG CAATTTCAGG CAATATTGAT
ACTGAAGAAG TAGATTGGCT TGAATTAGTT ACAAAAAATA ATGATTTGAA AAAATTTTTT
GTTGATTGA
|
|---|
| Protein sequence | MSIVITGTPG VGKHTIGKEL AQKLKLEIVD INEIAKNSGL FEENDESNDV DTEKLKVILR
EKISDRHIII GHLAPYVLDN EKVNRVIVLR RNPYDLIQVY DERGYSDKKS RENASSEILG
VITYDVINQF QDKVVQINVT GGKVQEVLEK VNSAISGNID TEEVDWLELV TKNNDLKKFF
VD
|
|---|
| |