| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1418 |
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| Symbol | |
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| ID | 5774090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1295884 |
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| End bp | 1296624 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641317064 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001582752 |
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| Protein GI | 161528926 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCACCT TCAAAACTAG ACTTTCTCAG ATCGCAAAAA CAAATGGCAA AGTAATTCTT
GCTAATGACT ATGATCCATC TGTAAAAAAT TTAGAAACAA AAACAATCTC TAATATCAAA
AAATTACATC CGTATCTTTG TGCAGTAAAA CTAAATTTTC ATTTGTTACT TCCACTAAGT
AGCAAACAAG TCCTCAACAT AAACAAAACA GCTCATAGGT ATGGTCTTCA AACAATTGCC
GACATTAAAC TAAATGATAT TGGCAACACA AATCGTGTTA CTACAGAAAA TTTGTGGAAG
ATGGGTTTTG ATGCAGTCAT TGCAAATCCT ATCATGGGAC TAGATAGTCT GAAAAATCTG
GTAAAATCTG CCCACAAAAA TGGCAAAGGA GTCATCACCT TGTGTCATAT GAGCGCCCCT
GAGGCTAAAT TATCATACGA CATGGAAGTA AAGATGCGAA AAAAGCAGCA ACTCTATCAA
CTATTCTTAG ATTGGGCACT GGAAGCAAAA GTTGATGGAA TTGTAGTTGG TGCAACTTTT
CCAAAAATTA TCCAGTACTG CTCAAAAAAG GCTGGACGAA AACTCAGTAT CTTTTCTCCA
GGTGTTGGAA CACAAGGTGG TAATGCAAGT GAAGTTATCT CTGCTGGAAC AAATTATCTA
ATTGTTGGAA GAACAATTCT AAATGCAAAA AAACCAACTG ATATTGCAAA AGATTTGCAG
CTAGACAGTC TTGGAAAGTA G
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| Protein sequence | MLTFKTRLSQ IAKTNGKVIL ANDYDPSVKN LETKTISNIK KLHPYLCAVK LNFHLLLPLS
SKQVLNINKT AHRYGLQTIA DIKLNDIGNT NRVTTENLWK MGFDAVIANP IMGLDSLKNL
VKSAHKNGKG VITLCHMSAP EAKLSYDMEV KMRKKQQLYQ LFLDWALEAK VDGIVVGATF
PKIIQYCSKK AGRKLSIFSP GVGTQGGNAS EVISAGTNYL IVGRTILNAK KPTDIAKDLQ
LDSLGK
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