Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1368 |
Symbol | |
ID | 5774005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1254350 |
End bp | 1255168 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641317013 |
Product | hypothetical protein |
Protein accession | YP_001582702 |
Protein GI | 161528876 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.880811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAAAAG AGTTTGATCC ATTTGTTGCA GAATGGTTTT CATTTGTAAA AAATCCAAAT TTCAATCTAG TTGAAAAGTG TCTCAAGTTT GCACAGATTC TAGAATATCC AGATCTTGAT ATTGAAAAAC ACATTGAAAA GATCACCAAA ATTGGAATGT CTCTTAAAGA GTCAATTAGT GATGTAAAAA ATCCAACATA TCTCATATCA ATGCTAAATG AACATCTCTT TGAAAATCTA GGATATAGTG GAGATGATGA TGACTATTAC AATCCAAAAA ATAATTTTCT AAACGAAGTA ATAGATAAAA AAACAGGACT GCCAATTACA ATATCGATTC TTTATGCAGA AGTAGCAAAG TTTATTGGAT TGGATCTCAA AATTGTAGGA TTTCCAAGTC ATATTCTGGT AAAATACAAT GAAGAGATGA TACTAGACCC ATTCTATGAT GGACGATTAT TAGACATTGA TGACTTGCAA GAGATTCTTG ATACAAATTA TGGTGGAGAG ATAGAGTTTA AACCTGAATT TTTAGACGAG ATAACACATG AACAAATTCT GGTTAGACTA ACTCGTAACT TGAAGAATTC CTATGTTCAA TCTTTTGTTT ATGACAAAGC ATTACGTTGC GTCAATATGG TATTAGCAAT TGAGCCAGAA TCACCTGATG ACATAAGGGA CAAAGGAATA CTAGAAGAAA GATTGCTAAA TTATGATAGT GCTTTAAAAT ATTTGAATAA ATATTTGGAA ATTAATCCAA ATGCAGAAGA TGTAGATTTT ATTTTAGAAT TGATTAGAAG TATAAAGACA AAAAATTAA
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Protein sequence | MEKEFDPFVA EWFSFVKNPN FNLVEKCLKF AQILEYPDLD IEKHIEKITK IGMSLKESIS DVKNPTYLIS MLNEHLFENL GYSGDDDDYY NPKNNFLNEV IDKKTGLPIT ISILYAEVAK FIGLDLKIVG FPSHILVKYN EEMILDPFYD GRLLDIDDLQ EILDTNYGGE IEFKPEFLDE ITHEQILVRL TRNLKNSYVQ SFVYDKALRC VNMVLAIEPE SPDDIRDKGI LEERLLNYDS ALKYLNKYLE INPNAEDVDF ILELIRSIKT KN
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