Gene Nmar_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1353 
Symbol 
ID5773936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1238728 
End bp1239270 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content37% 
IMG OID641316998 
Producthypothetical protein 
Protein accessionYP_001582687 
Protein GI161528861 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.086878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CAGATGAATT ACGTGCAGAT CACATTCAGG TAAGAAGACT AGAAAAGATT 
GTCTTCAAAT GTGCTGAGGA ATTAAAAAAC GGGGAGGACA TTCCGTTTTC TGATCTTACA
AAAATCACCA TTGTAATATC TGAATTTGTT GATACAATTC ACCATTCCCG AGAAGAGGAC
TCTTATTTTC CGTGCGTGGC AAGTCATGAT TCTCTAAAAG ATGAGATTCA CAAATTTCTA
GTAGAGCACG AGTTTGGAAG AAACGTTGCA AAGAAAATTC ACCATCATTT GAAACGATGG
AAGGCAGGAG AAGATGCACG AGAGTCAGTG TCAAGGTATC TCAAAACATA TGCAGTATTT
CTAAATGATC ATCTAAACAA AGAGAACAAG TTCTTTGATG ATGCAGAAGA AAAAGTACTT
TCAGAACAAG AAGAGATAGA CATGTACGAG CAGTACCGCT CAATTTTTGC AGTTGTAAAA
AAAGTTGAGG ACATGATTAA GGAAATTGAT TATCTGGAAT CCTGTCCGTG GTATCAAAAG
TAA
 
Protein sequence
MSATDELRAD HIQVRRLEKI VFKCAEELKN GEDIPFSDLT KITIVISEFV DTIHHSREED 
SYFPCVASHD SLKDEIHKFL VEHEFGRNVA KKIHHHLKRW KAGEDARESV SRYLKTYAVF
LNDHLNKENK FFDDAEEKVL SEQEEIDMYE QYRSIFAVVK KVEDMIKEID YLESCPWYQK