Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1353 |
Symbol | |
ID | 5773936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1238728 |
End bp | 1239270 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641316998 |
Product | hypothetical protein |
Protein accession | YP_001582687 |
Protein GI | 161528861 |
COG category | [S] Function unknown |
COG ID | [COG3945] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.086878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA CAGATGAATT ACGTGCAGAT CACATTCAGG TAAGAAGACT AGAAAAGATT GTCTTCAAAT GTGCTGAGGA ATTAAAAAAC GGGGAGGACA TTCCGTTTTC TGATCTTACA AAAATCACCA TTGTAATATC TGAATTTGTT GATACAATTC ACCATTCCCG AGAAGAGGAC TCTTATTTTC CGTGCGTGGC AAGTCATGAT TCTCTAAAAG ATGAGATTCA CAAATTTCTA GTAGAGCACG AGTTTGGAAG AAACGTTGCA AAGAAAATTC ACCATCATTT GAAACGATGG AAGGCAGGAG AAGATGCACG AGAGTCAGTG TCAAGGTATC TCAAAACATA TGCAGTATTT CTAAATGATC ATCTAAACAA AGAGAACAAG TTCTTTGATG ATGCAGAAGA AAAAGTACTT TCAGAACAAG AAGAGATAGA CATGTACGAG CAGTACCGCT CAATTTTTGC AGTTGTAAAA AAAGTTGAGG ACATGATTAA GGAAATTGAT TATCTGGAAT CCTGTCCGTG GTATCAAAAG TAA
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Protein sequence | MSATDELRAD HIQVRRLEKI VFKCAEELKN GEDIPFSDLT KITIVISEFV DTIHHSREED SYFPCVASHD SLKDEIHKFL VEHEFGRNVA KKIHHHLKRW KAGEDARESV SRYLKTYAVF LNDHLNKENK FFDDAEEKVL SEQEEIDMYE QYRSIFAVVK KVEDMIKEID YLESCPWYQK
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