| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1340 |
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| Symbol | |
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| ID | 5774208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1227903 |
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| End bp | 1228823 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641316985 |
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| Product | transcription factor TFIIB cyclin-related protein |
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| Protein accession | YP_001582674 |
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| Protein GI | 161528848 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000744308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTCGG GAAGGTTTTT TGATCATATC ATGAGTTCAC AAGAAATCAA ATGTCCTAGA
TGTGGAAAAA ACGCGCTAGT CACTGATGTT GAATCGTCAG AAATATTTTG TTCAAATTGC
GGTATTGTGG TTGAAGAGAA AACTAATGAC CGCAGACCCG AAAGAGCATT TGCAAATTCA
ACTACCGATA AATCCCATAC TGGCGACAAG ACATCTTTGA CAAGACATGA CAGGGGACTT
AGCACTGTGA TTAACCCCTT TGACAAAGAT TCTGCTGGAA GTCCCTTGTC TGCGTCAATG
AAATCATCCA TGACACGACT CCGGAAATGG GATAATCGAA GTCGCATAAA GACCAATGAT
GACAGAAATT TGCAACAAGC ACTGCTGGAA TTGTCAAAAA TGAAAGAAAA ATTGTCCTTG
TCTGACGCAA TTGCTGAAAA AGCATCGTAC ATCTATAGAA AGGCACTGGA GAAAAAACTG
GTCAAGGGGC GTTCTATTGC ATCTCTTGTT GCAGCTTGTC TTTATGCCGC ATGCCGTGAA
TCAGAAGCTC CCAGGACACT CCGAGAAGTT GCAGCATCCA TAGGAATTAA ACGCAAAGAA
ATCTCTGCAA CATACCGGCT CATATTCAAA GAGTTAGACC TTAAAATGCC CGTAATTGAC
TCTGTCTCCT GTATTGCAAA AATTGCAAGC AATGCAGAAC TGTCTGAGAA AACAAAAAGA
TATGCCATAA AAATTCTAAA AAAGGCAGAA AAACAAAACA TGTCTGCAGG GAAGCATCCT
ATGGGACTGG CTGCCTCTGC ATTATACCTG GCGTCAATAG ATTTGGAGGA ATTTAGGACT
CAAAAAGAAA TTGCAGATGC AGCGGGAATC ACAGAGGTTA CTGTCAGAAA CAGATGCAAA
GGTCTCAAAC AAATGATCTA A
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| Protein sequence | MSSGRFFDHI MSSQEIKCPR CGKNALVTDV ESSEIFCSNC GIVVEEKTND RRPERAFANS
TTDKSHTGDK TSLTRHDRGL STVINPFDKD SAGSPLSASM KSSMTRLRKW DNRSRIKTND
DRNLQQALLE LSKMKEKLSL SDAIAEKASY IYRKALEKKL VKGRSIASLV AACLYAACRE
SEAPRTLREV AASIGIKRKE ISATYRLIFK ELDLKMPVID SVSCIAKIAS NAELSEKTKR
YAIKILKKAE KQNMSAGKHP MGLAASALYL ASIDLEEFRT QKEIADAAGI TEVTVRNRCK
GLKQMI
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