Gene Nmar_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1332 
Symbol 
ID5774599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1222164 
End bp1222601 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content34% 
IMG OID641316977 
Producthypothetical protein 
Protein accessionYP_001582666 
Protein GI161528840 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000172519 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGAAT TCAAGCATAT TTTGGTACCC TTTGACAATT CTGAAAAAGG CCTCAAGTCC 
ATTACTACTG CGTCAAAAAT TGCGGGAAAT CTTGGAGGAA AAATCACAAT TTTGCAATGT
GTGGAAAAAA AGATTCCAAA ATTCATGTTC TTTAAAACAA AACAAGACAA GATAGATGCC
GCAAGAGATG TAAATATCGC TGAAAACGAG GCTTCTAAAT TTAGAGAAAT TGCAAAAAAG
TATGGTGCTA ATGTTGCAAC AAAAATAGAA AAAATAGAGG ATGATCCCCA TCAATACATT
ATAGATTATG CAAACAAAAG TGACGTTGAC CTGGTGGTTA TGAATCCGTC TGAGAACATC
AATACTACTG AGATTCACCA GAGTGTTGTT GACAAAATTT CAAGGAATCT TAATTGTTCT
TTGTTGAGGA TACAATGA
 
Protein sequence
MTEFKHILVP FDNSEKGLKS ITTASKIAGN LGGKITILQC VEKKIPKFMF FKTKQDKIDA 
ARDVNIAENE ASKFREIAKK YGANVATKIE KIEDDPHQYI IDYANKSDVD LVVMNPSENI
NTTEIHQSVV DKISRNLNCS LLRIQ