| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1321 |
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| Symbol | |
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| ID | 5773940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1208508 |
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| End bp | 1209338 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316965 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001582655 |
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| Protein GI | 161528829 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000000224332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAAAAG TAGCTCTTGT AACTGGAAGT TCTTCAGGAA TTGGATTAGA AGCATCACTA
GCACTTGCAA AAGATGGATA TCACACATTT GCCAGTATGA GGGACACATC AAAAGCAGGA
GAATTAGAGA ATGCTGCAAA AAAAGATAAT CTTCCAATCG AAGTAATAGA GCTTGATGTC
GATAAAGAAG AATCAATTGT TTCTGCAGTA AAAAAAGTAA TAGATTCAGC AGGAAGACTG
GATGTTTTAG TTAACAATGC AGGATATGGA CAGTTTGGAT GTACAGAAGA TGTCTCAGTT
GATGATTTTA GAAAACAATT TGAAACTAAT TTCTTTAGTA TTGTAAGAAT TATTCAAGAA
GTTACCCCAA TTATGAGAAA TCAAAATTCG GGAAGCATCA TAAACATTAG TTCTGTTGCT
GGAAGAATGG GATTACCAGG TTCTCCAGCA TACATTAGCT CAAAATTTGC ATTAGAAGGA
CTAGGAGAAT GTTTACGATA TGAATTAGGT CAGTTTGGAA TCAAGACCAC TCTAATTGAA
CCAGGAGTTA TCAAGACAAA CTTTTTTGAA TCAATGAAAA TTCCAGATTC AAAGACAGAC
CCAAAATACA AGGAATTAAC TGATCACATC TTAGCAGGAT TAAAGATGAT GGTTCAGATG
GGCACTGCTC CATCACAAGT AGCTGAAGTA ATTATCAAGG CAATTCATGA TGATGAGATG
CTTCCAAGAT ATGTGGTTGG AACTGATGCT GCAATGTTTA TGGAGGCAAA AAAGATGAAG
ACAGACCTAG AATTTGAGAA ATACATGAGC AAAGAGCTCT TTCCAGGATA A
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| Protein sequence | MQKVALVTGS SSGIGLEASL ALAKDGYHTF ASMRDTSKAG ELENAAKKDN LPIEVIELDV
DKEESIVSAV KKVIDSAGRL DVLVNNAGYG QFGCTEDVSV DDFRKQFETN FFSIVRIIQE
VTPIMRNQNS GSIINISSVA GRMGLPGSPA YISSKFALEG LGECLRYELG QFGIKTTLIE
PGVIKTNFFE SMKIPDSKTD PKYKELTDHI LAGLKMMVQM GTAPSQVAEV IIKAIHDDEM
LPRYVVGTDA AMFMEAKKMK TDLEFEKYMS KELFPG
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