| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1310 |
|---|
| Symbol | |
|---|
| ID | 5774683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1198744 |
|---|
| End bp | 1199427 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641316954 |
|---|
| Product | class I glutamine amidotransferase |
|---|
| Protein accession | YP_001582644 |
|---|
| Protein GI | 161528818 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00000242298 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATG TATTACTTGT ACAAAACACA AGAATCGAAG GTTCTGGATA TCTTGGTGAC
TTGTTAAAGA AAGATGGATT TGATATTACA TCAGTTAATG CAAAACATGA GAAACTTCCA
GACAAAGATT TTTCTCTTGT TGTAATTTTA GGAGCTCCTG AAAGTGCAAA TGATGATTTG
CCTTATCTTA GAGATGAACA ACAACTAATC AAAAATTCTG TTGAAAAAAA TATTCCTGTT
TTGGGAATTT GTTTGGGTTC TCAGTTAATT GCAAAAACAT TTGGTGGCAA AGTTTACTCT
GGTCTAAAAA AAGAGATTGG GTTTTACAAT GATCTTCAGG TCTCATATAA CTCTGGATTG
TTTTCTGGCT TTCAAAACCC CTTTACTGTA TTTCATTGGC ATGGTGACAC CTTTGACTTG
CCTGAAGGTG CGATTAATCT AGCCTCATCT GAGCATTACC AAAACCAAGC ATTCAGATAC
AAAAGCGCAG TTGGATTGCA ATTTCATTTG GAGGTAAATG AAGAGATGGT AAATCTCTGG
CTTGATAACA CTGAAGAAAA ATTGCAAAAA ATCCCTTACA TCGATCCAAA AAAAATCCGT
TCTGATATTG ATGAAAATAT TTCAACTGTA AAATCGAATA TGAAGAATTT TTACAATAAT
TTCAAATCAG AATTTCAACT TTGA
|
|---|
| Protein sequence | MSDVLLVQNT RIEGSGYLGD LLKKDGFDIT SVNAKHEKLP DKDFSLVVIL GAPESANDDL
PYLRDEQQLI KNSVEKNIPV LGICLGSQLI AKTFGGKVYS GLKKEIGFYN DLQVSYNSGL
FSGFQNPFTV FHWHGDTFDL PEGAINLASS EHYQNQAFRY KSAVGLQFHL EVNEEMVNLW
LDNTEEKLQK IPYIDPKKIR SDIDENISTV KSNMKNFYNN FKSEFQL
|
|---|
| |