Gene Nmar_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1250 
Symbol 
ID5773920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1147717 
End bp1148436 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content41% 
IMG OID641316894 
Productprotease inhibitor Kazal-type 
Protein accessionYP_001582584 
Protein GI161528758 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT CTTATGGAAT TATAGCTGCA GTTGGAATTT TAGTTGCAAT CTCAGTTGGA 
TTAATTTCAA TGTCTCCTGA TGAGATTATT GAACCTAGAA CAGTTGAAGA ACAACCAATT
GCTTGTACTA TGCAATGGGA TCCAATGTGT GGAGTTGATG GTGAAACTTA CGGTAATTCT
TGTATGTTGG ATGCTGCTAA TGTCAAACTA GATTATGTAG GTGAATGTGT TATCGCAGAG
CCTGAGCCAG AACCAATTCC TGAACCAGAG CCTGAGCCAG AACCAATTCC TGAACCAGAG
CCTGAGCCAG AACCAATTCC TGAACCAGAG CCTGAGCCAG AACCAATTCC TGAACCAGAG
CCTGAGCCAG AACCAATTCC TGAACCAGAG CCTGAGCCAG AAACACAATC TGATTTACCA
ATGTCACTAA CTATTTCTGC ACCTGAAGGT TCAGGTGTTC CTGGATGTGA GGAAACTAAT
GAATGCTATT TACCTTATGA AGCAACTGTA GCAGTTGGTA CAACCGTTAC TTGGAGTAAT
GATGACACTG CAGCACATAC TGTAACTAGT GGAAATGTAA GTGCAGGACC TACTGGAGTA
TTTGATTCAG GTTTGTTCAT GTCTGGTGGA ACTTTTGAAT TCACATTTGA AGAAACAGGA
ACCTATGATT ACTTTTGTAT GGTTCATCCT TGGATGACTG GTATAATTCA CGTGGAATAA
 
Protein sequence
MNFSYGIIAA VGILVAISVG LISMSPDEII EPRTVEEQPI ACTMQWDPMC GVDGETYGNS 
CMLDAANVKL DYVGECVIAE PEPEPIPEPE PEPEPIPEPE PEPEPIPEPE PEPEPIPEPE
PEPEPIPEPE PEPETQSDLP MSLTISAPEG SGVPGCEETN ECYLPYEATV AVGTTVTWSN
DDTAAHTVTS GNVSAGPTGV FDSGLFMSGG TFEFTFEETG TYDYFCMVHP WMTGIIHVE