Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1245 |
Symbol | |
ID | 5774388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1141481 |
End bp | 1143562 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641316889 |
Product | SMC domain-containing protein |
Protein accession | YP_001582579 |
Protein GI | 161528753 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACAT CAATTGAATT GGGGGATTTT TTAGCACATT CAGATACAAA ACTAGAGTTT GATAACGGGG TAACTGTTTT TGTAGGACAT AACGGTGCAG GAAAATCAAG TATTATTGAT GCAATTACAT TTGCATTGTT TGGACAACAT ACAAGAAAAT CAAACAAAGG GTTAATCAAA CGTGGTGCAA ATCAAGGATA TTCCAAAGTA AATTTTTCAG TTAATGGAAA ATCCTTTGAA GCTGTAAGAA AGATTGACAG TAAAGGAACT CTTTCAGCAA AATTCACTGA AATTGTAGGA GATGAAAAAA TAGAGATTGC AGCAGGTGAA CGAAAACAGT TTGGGGAATC AATGACTCAA GAAGTTGAAA AAGCAATTGG ATTAGACTTT GAAAAATTAA AAGTTGCATC AATTGTACAA CAAGGAGAAT TAAATGCAAT AATCAATGCA AAACCAAAAG AGTTCAAAGA ATTGCTGAAT GCAATCATAG GGATTGACAA GCTTGATGTT GCTTCTGAAT CAATGAAGAC CGTAAACAAA GAATTTCGTG AAAGCATTAG ATCAAGAATT GGATATGATG ATACACATAT CGATATTTTG TCAAGAGAAT TAGAAAAATA TCAAAACGAA ATCAAGGAAT CAGAGCCCCA AAAAATTCAA TTAGAAAATA AACAAAAACA ATTACAGAGT GAAGTTGAAG AGTTAAGGAA AAAAGTGGAA ACTGAAGCCC CAAAAATTGA CAAACTCAAT CAACTTGAAG CAAGAAAAAG AGAGTTAATT GAATATGCAA AAGAGGCAAT TCATGAGATT CAGCAAGAAA TAAGCGAAAA TGAGCGTAAA ATACGTGATT GTGAGGGATG TTTTGAGTAC GCTAGCCTCA AAGAGGATTT AGAGTCCAAA ATTCAAAAAG TTGAGCAGGC AGTAGAGGAG ACATTAAAGA AAATACAAGA GATGAAAAGC CAAACTGCAT CGCTTAGAGA AAAGCAATCA CTTGCTACAA AACTCCAGCT CAAGGACAAT AAATGTCCAG TATGTGATTC AGATGTAGAA AAGCTAAATC CATTATTCCA AGAAGAACAC CTTAAACAAG AACTAAAAAC ACTTCAAGAT CAAATTATCT TAAAAGAAAA AGAGCATCAG ATGTACAATC AAAAAAGAAA TGAATTCTCA GAAAAACTAC AATCAGCAAG AGATGCAGAA GCAACCCTCA GAGCTCATTC AATTTCATCC AAAGAAGAAT TAGATAAGAT TCAAGAAGAA GTTAAGATAA AAAAAGAAAA CATACAAAAA ATTCCTTCAA CTAATAATTC AAATTTAATT GAAATATCAC AGATTGACTC TCATGCAAAG ACAATTTTTG AAAATATTTC ACAATTAGAA TCAGAAACAA AGGGATTTGA TGAGCAAGAA TTCATTAATC TTAAAAAAAG TGTTAACGAA AAACAGATGA AACTATCAAA TATTGATCAA CAAATAGGAG CAATTTTAGA AAAGATTTCA AAAGGAGTTG AGCAAATCAA AATTTTTGAA AATGCAATTT CAGAATTAAA AGTTGTAAAA GAATATGTTA CAAATCTTGA TGATATACAG AATAATGTAT TTAGCAGAGA CGGTCCAGTA GCTACAAGTT TGAGATCATG GGCACTGAAT GCAATTTCAG CAAAAGCATC AGAGTATCTT GCGTTACTTA ACACAAAAAT TCAAAGAATT CAACTTACTG AAAAGACAAG AGATATTTCA ATAATATGTA ATTCAAAGAG TGAGGAGTTA GATTTGGAAT CACTTAGCGG AGGAGAAAAG GTCAGCGTAG CATTATCATT ACGATTGGGT ATGGCAAATC TACTTGGAGG ATCAAATCTT AACTTGATGA TTCTAGATGA GCCTACAACC CACCTTGATG CTGAGAGAAA AAAATCACTA GTTAGTGTGC TGTCGCAGTT ATCAAATATT TCAAATTCAG AAACACCAAT GCAATTTATC ATAATTACGC ACGATGCAGA GATTTTTGAA GATTCTACAG TGGAACAAAT TTACAAATTT GAATCATCTG AGCAAGGTAG CAGAGTCACA TTACTCAATT GA
|
Protein sequence | MITSIELGDF LAHSDTKLEF DNGVTVFVGH NGAGKSSIID AITFALFGQH TRKSNKGLIK RGANQGYSKV NFSVNGKSFE AVRKIDSKGT LSAKFTEIVG DEKIEIAAGE RKQFGESMTQ EVEKAIGLDF EKLKVASIVQ QGELNAIINA KPKEFKELLN AIIGIDKLDV ASESMKTVNK EFRESIRSRI GYDDTHIDIL SRELEKYQNE IKESEPQKIQ LENKQKQLQS EVEELRKKVE TEAPKIDKLN QLEARKRELI EYAKEAIHEI QQEISENERK IRDCEGCFEY ASLKEDLESK IQKVEQAVEE TLKKIQEMKS QTASLREKQS LATKLQLKDN KCPVCDSDVE KLNPLFQEEH LKQELKTLQD QIILKEKEHQ MYNQKRNEFS EKLQSARDAE ATLRAHSISS KEELDKIQEE VKIKKENIQK IPSTNNSNLI EISQIDSHAK TIFENISQLE SETKGFDEQE FINLKKSVNE KQMKLSNIDQ QIGAILEKIS KGVEQIKIFE NAISELKVVK EYVTNLDDIQ NNVFSRDGPV ATSLRSWALN AISAKASEYL ALLNTKIQRI QLTEKTRDIS IICNSKSEEL DLESLSGGEK VSVALSLRLG MANLLGGSNL NLMILDEPTT HLDAERKKSL VSVLSQLSNI SNSETPMQFI IITHDAEIFE DSTVEQIYKF ESSEQGSRVT LLN
|
| |