| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1061 |
|---|
| Symbol | |
|---|
| ID | 5773917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 934517 |
|---|
| End bp | 935347 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641316703 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582395 |
|---|
| Protein GI | 161528569 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTA TGAATATCAA AAGAGTAGTC TGGTTTTTTG TTTTTATGGG AATATACTCT
TTGATCTTTC AAATCGGTTC AATGTCAGAA CCAACAAGAG AAGAAGTAGA AGTATTCATG
GAAGAATTTG AAAATGTCAC AGAAGACATT GATGCCATAG GATTATTTGT TCACAATACA
ACACTATCAC TTCCAATGTT CATTCCAGGA ATTGGTGTAG CATGGGGATT ATTTTCAGCT
TGGTCAACAG GATATGCATT TGCCAATATA GCTGCAATCA CACCAGGGCT TGCAGAAACC
CCAGCATTTT CAATTCTATA TTATTCCCCT TACGGATTTA TGGAAATTGT AGCCTATTCT
CTTGGTATTT CAAGAGGTTT TATCCTAATT GTAGGAATCA TCAAAAAGAA TAATCTCAAG
TCGTTGTTAA AACCAACAGG GGCAGAAATT GCCATAGTCA TAGGCCTGTT ACTAGCAGGA
GGATTCTTGG AGCATTATAT GATAGAATCA GAAGGAAGTA ATCCAGAGAT TTCTAAAGAA
GATGAACCAG TTACATATTC ATCAGAATTA CCAAAAGCTT GTGACGGAGT AACCAGTGTA
GAGACTCAAC TTCATCCTAC AGGTGAAGAA TGTGTGAAAT TGCTTAATGA GCAAATTTTT
GTTTATTGTT TGTCTGAAAA TAATGAAGAT GAATCTATTG CTCAAGGTTG TAGAGCAAAA
GCACTAATGC AAATGGATCA AAATTGTAAG GGAAATGAAC AATCACCTTA CAACACATGT
ATGATGACAG AATTAAAACA GGCATATCAG AACATGGTTC CTAACCAATA A
|
|---|
| Protein sequence | MTFMNIKRVV WFFVFMGIYS LIFQIGSMSE PTREEVEVFM EEFENVTEDI DAIGLFVHNT
TLSLPMFIPG IGVAWGLFSA WSTGYAFANI AAITPGLAET PAFSILYYSP YGFMEIVAYS
LGISRGFILI VGIIKKNNLK SLLKPTGAEI AIVIGLLLAG GFLEHYMIES EGSNPEISKE
DEPVTYSSEL PKACDGVTSV ETQLHPTGEE CVKLLNEQIF VYCLSENNED ESIAQGCRAK
ALMQMDQNCK GNEQSPYNTC MMTELKQAYQ NMVPNQ
|
|---|
| |