| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0987 |
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| Symbol | |
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| ID | 5773422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 863158 |
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| End bp | 864105 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316626 |
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| Product | transcription factor TFIIB cyclin-related protein |
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| Protein accession | YP_001582321 |
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| Protein GI | 161528495 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.51718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATA AGGCAATTGC TGAAATCCAA GTAATTATGC TTAGAAATCA AATGGTCACA
GGATCAAAAT GTCCAGCCTG TGGCGATAAG AAAATGATTA CAGATGAGAA CACCGGAGAA
TTATTTTGTG GAAAATGTGG ATTTGTAGTA TCAGATAAAA TTGCAGACAC AGGTGCTGAA
TGGCGTTCTT TCTCAAATGA TGAAGGAAAC AAAGCCAGAA CAGGTGCAGG AACATCACTT
ACAATGCATG ATATGGGATT ATCAACAGTA ATTGGTGCAG CCAACAAAGA TTCAACAGGA
AAACCACTAT CTGCAAGTGT CAAAAGTTCA ATTGAAAGAC TACGAACTTG GGACAGTAGA
AGTCAAGCAC ATTCTTCAGC AGACAGAAAT CTGAGACAAG CACTCAATGA AATGGACAAA
CTAAAAGACA AACTTGCATT AACTGATGCA GTAATTGAAA AAGCAGCTTA CATTTACAGA
AAAGCAATGG AGAAGAAACT AGTCAGAGGT CGTTCAATTC AAGGATTAGT TGCAGCATGT
CTTTATGCAT CTTGTAGAAA TACAGAAACT CCAAGAACAC TAGATGATGT TGCAAAAGGA
ATCAACATTA GAAGAAAAGA TGTTGCCAGA TGTTATAGAT TAATTTTCAG AGAACTAGAA
CTAAAAATGC CAGTAGTTGA TCCTGTAAAA GGAGTTTCAA GAATTGCAAG CATTGCAGAG
CTTAGTGAGA AAAGTAAACG TAAAGCAATT GCAATTCTTA ATGAAGCAAA GAAGATGGGA
GTAGTGGCAG GAAAAGATCC AATGGGAATA GCTGCTGCAG CACTTTATCT TGCATGTATC
AGTACAGGAG AGGTAAAATC TCAAAAGGAC ATATCCATAG CATCTGGAGT AACTGAGGTT
ACTATCAGAA ACAGATGTGC AGGATTAAGA AAGATGATTA ACGATTAA
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| Protein sequence | MDNKAIAEIQ VIMLRNQMVT GSKCPACGDK KMITDENTGE LFCGKCGFVV SDKIADTGAE
WRSFSNDEGN KARTGAGTSL TMHDMGLSTV IGAANKDSTG KPLSASVKSS IERLRTWDSR
SQAHSSADRN LRQALNEMDK LKDKLALTDA VIEKAAYIYR KAMEKKLVRG RSIQGLVAAC
LYASCRNTET PRTLDDVAKG INIRRKDVAR CYRLIFRELE LKMPVVDPVK GVSRIASIAE
LSEKSKRKAI AILNEAKKMG VVAGKDPMGI AAAALYLACI STGEVKSQKD ISIASGVTEV
TIRNRCAGLR KMIND
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