Gene Nmar_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0957 
Symbol 
ID5774340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp834865 
End bp837357 
Gene Length2493 bp 
Protein Length830 aa 
Translation table11 
GC content34% 
IMG OID641316596 
Productpeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_001582291 
Protein GI161528465 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00150459 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACGTTA ATCCCATAAA TTATGAGTTA ACATTTGAGC CAGATCTTAA AAAATTCACA 
TTCTTGGGAA CAGAAATTAT TACTGTTTCT TGCAATAAAG CAATTAATCT TATCACACTA
GATTGTGCAG AAATTAAAAT AAAATCTTGT ACTGTAAAGT CTGGCTCTAA AATAATAAAA
TCTACTCCAA AGACTGATGA AAAAAAAGAG AGACTGTCAA TTAAACTAGG AGAAAAAATC
AAAGGCAAAG CAACAATCCA TCTAGAATTT CAAGGAATTC TAAATGACAG ATTACTGGGA
TTTTATCGAA GTCAATACAA ACAAGGTGGA AAAACAAAGT ATCTTGCAAC TACTCAATTT
GAGGCAGCTG ATGCAAGACG TGCATTTCCA TGTTGGGATG AGCCTGAAGC AAAGGCAACA
TTTGAGATTT CAATTATTGC AGAAAACAAA TTCACTGCCA TTTCAAACAT GCCAGTCCAA
TCAAAGAAAA AAATCAAAAA TAAAACATTA TACAAGTTTG GCAAAACACC TGTTGTCTCA
ACATATCTCA TCTATCTTGG AGTTGGTGAG TTTGAATATC TAACTGGCAA AACGGGCAAA
GTTCAGATTA GAGTTGTAAC TACAAAGGGA AACAAATCAA AAGGAAAATA CTCTTTAGAA
TTAGGCAAGA AACTATTAAC CTCTTATGAA AAATATTTTG GAATAAAATA TCCTCTACCT
AAATTAGATT TGATTGCAAT TCCTGACTTT GCAGCAGGAG CAATGGAGAA CTGGGGTGCA
ATAACATTTA GAGAAACAAT TCTACTTTAT GATCCTAAAA CATCTTCTAC TAGAACAAAA
CAATTCATTG CTGAAGTAAT TTCACATGAG ATTGCACATC AATGGTTTGG TAATCTCGTC
ACTATGAAGT GGTGGAATGA TTTGTGGCTT AACGAAAGCT TTGCAACATT CATGGCAACA
AAGTTTGTTG ACAAATTCTA TCCTGAATGG AATTTGTGGG ATCAATTCAT TGAAGATGCA
ATGAATACTG CCATGGGATT AGATGCTCTT AAAACCACTC ATCCAATTGA TGTCAAAGTA
AAATCTCCTG CTGAAATTCG AGAAATCTTT GATGCAATAT CTTATGATAA AGGTGGATGC
GTTTTGAGAA TGCTTGAACA CTATGTTGGT GAGAAAAATT TCCGAGCCGG TCTCAAAAAA
TATCTTTCAG CATTCAAGTA TGGAAATGCC CAAGGACAAG ACTTGTGGGA TGCAATTGGC
AAAGCCTCAA AAATGCCAGT AAGCTCTATG GTCAATACGT GGCTAAAACA GCCTGGATTT
CCTCAAATTG ATATCACTCA AAATAACAAT GATTTGATAA TTAAACAAAA CCGCTTTTTG
ATGGAACCTA CAAAGAAAAC CCAAAAAGGA TTGTGGCATG TCCCAATTAC CTATGGTTTA
GGAAAGGAGA CCAAAACAAA ACTATTAACA AAAAAATCTA TGACTGTCAA AGCTCCTAAA
GGACCTGGAT TTGTAGCAAA CATTGGTCGT ACTGGATTTT ATCGTGTAAA ATATGATGAT
GGAATCTTAC TTGATCTCAA AATGTTAGTT GATCAAAAAC AAATTCCTCA CATTGATAGA
TGGGCAATTC AAAATGATTT GTTTGCATTA TGTGTTGCAG GAAAAGAAGA TGTAGAAAAT
TACTTGGATT TCTCTGATGC ATATTTTGAT GAAGACTCTT ATCTTCCACA AACAAATGTT
GCAAACAATC TAAACTTTTT AGCATCATTA ACTTTCTTTG AGGATTTCAC AGAACAAATC
AGAAGTTATG CTATCAATTA CTTTAGAAAG ATTTTATCTA ATCTTGGTTG GGTTCCTCAA
AAAACAGACA AACATACTGA TGCATTCATG AGAGGTTATG CAATAACTGT ATTGGGTAAA
TTTGGTGATG AACATGTACT TGAGCAGGCA CAAATTAAAT TCAAAGAATT TTTGAAAAAC
CCATCATCAC TTCATCCTGA TATTAGAGAA CCTGTTTTCT CAATTATTGC ACGTACTGGT
AATGCAAAGA CTCATTCACA ATTTGTAACA TTATACAAAA AAGCAAAAAC AACTGAGGAA
AAATTAAGAT TCTTGGGTGC AATGTGCAGT TTCAAGAATG AAAAATTATT GATCAAAACT
TTACAATTCT CTCAAACCGC AGAGGTTCGT TCTCAAAACA TGCAATTACC AATCATGAAG
ATTGCTGCAA ATCCCTATGG AAAGAAGATT CTTTGGCCTT GGTTAAAGAA GAATTGGGGC
AAATTGAGCA AAAAAGTAGG CTATGGTAAT CCTTTGTTTA ATAGAATTGT TGCAAGTATT
GCACTAGTTG CAGATGACTC TATGGAAAAA GACATCAAAT CATTTTTCAA ATCTCATCCA
ACTCCTGGAA CAGAAAGAAC TCAAGCTCAA ACATTAGAAA AGATACGAAT CCATTCCCGA
TTCTTACGCC AAATGAGAAA AGAATTCAAG TAA
 
Protein sequence
MDVNPINYEL TFEPDLKKFT FLGTEIITVS CNKAINLITL DCAEIKIKSC TVKSGSKIIK 
STPKTDEKKE RLSIKLGEKI KGKATIHLEF QGILNDRLLG FYRSQYKQGG KTKYLATTQF
EAADARRAFP CWDEPEAKAT FEISIIAENK FTAISNMPVQ SKKKIKNKTL YKFGKTPVVS
TYLIYLGVGE FEYLTGKTGK VQIRVVTTKG NKSKGKYSLE LGKKLLTSYE KYFGIKYPLP
KLDLIAIPDF AAGAMENWGA ITFRETILLY DPKTSSTRTK QFIAEVISHE IAHQWFGNLV
TMKWWNDLWL NESFATFMAT KFVDKFYPEW NLWDQFIEDA MNTAMGLDAL KTTHPIDVKV
KSPAEIREIF DAISYDKGGC VLRMLEHYVG EKNFRAGLKK YLSAFKYGNA QGQDLWDAIG
KASKMPVSSM VNTWLKQPGF PQIDITQNNN DLIIKQNRFL MEPTKKTQKG LWHVPITYGL
GKETKTKLLT KKSMTVKAPK GPGFVANIGR TGFYRVKYDD GILLDLKMLV DQKQIPHIDR
WAIQNDLFAL CVAGKEDVEN YLDFSDAYFD EDSYLPQTNV ANNLNFLASL TFFEDFTEQI
RSYAINYFRK ILSNLGWVPQ KTDKHTDAFM RGYAITVLGK FGDEHVLEQA QIKFKEFLKN
PSSLHPDIRE PVFSIIARTG NAKTHSQFVT LYKKAKTTEE KLRFLGAMCS FKNEKLLIKT
LQFSQTAEVR SQNMQLPIMK IAANPYGKKI LWPWLKKNWG KLSKKVGYGN PLFNRIVASI
ALVADDSMEK DIKSFFKSHP TPGTERTQAQ TLEKIRIHSR FLRQMRKEFK