Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0957 |
Symbol | |
ID | 5774340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 834865 |
End bp | 837357 |
Gene Length | 2493 bp |
Protein Length | 830 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641316596 |
Product | peptidase M1 membrane alanine aminopeptidase |
Protein accession | YP_001582291 |
Protein GI | 161528465 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00150459 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACGTTA ATCCCATAAA TTATGAGTTA ACATTTGAGC CAGATCTTAA AAAATTCACA TTCTTGGGAA CAGAAATTAT TACTGTTTCT TGCAATAAAG CAATTAATCT TATCACACTA GATTGTGCAG AAATTAAAAT AAAATCTTGT ACTGTAAAGT CTGGCTCTAA AATAATAAAA TCTACTCCAA AGACTGATGA AAAAAAAGAG AGACTGTCAA TTAAACTAGG AGAAAAAATC AAAGGCAAAG CAACAATCCA TCTAGAATTT CAAGGAATTC TAAATGACAG ATTACTGGGA TTTTATCGAA GTCAATACAA ACAAGGTGGA AAAACAAAGT ATCTTGCAAC TACTCAATTT GAGGCAGCTG ATGCAAGACG TGCATTTCCA TGTTGGGATG AGCCTGAAGC AAAGGCAACA TTTGAGATTT CAATTATTGC AGAAAACAAA TTCACTGCCA TTTCAAACAT GCCAGTCCAA TCAAAGAAAA AAATCAAAAA TAAAACATTA TACAAGTTTG GCAAAACACC TGTTGTCTCA ACATATCTCA TCTATCTTGG AGTTGGTGAG TTTGAATATC TAACTGGCAA AACGGGCAAA GTTCAGATTA GAGTTGTAAC TACAAAGGGA AACAAATCAA AAGGAAAATA CTCTTTAGAA TTAGGCAAGA AACTATTAAC CTCTTATGAA AAATATTTTG GAATAAAATA TCCTCTACCT AAATTAGATT TGATTGCAAT TCCTGACTTT GCAGCAGGAG CAATGGAGAA CTGGGGTGCA ATAACATTTA GAGAAACAAT TCTACTTTAT GATCCTAAAA CATCTTCTAC TAGAACAAAA CAATTCATTG CTGAAGTAAT TTCACATGAG ATTGCACATC AATGGTTTGG TAATCTCGTC ACTATGAAGT GGTGGAATGA TTTGTGGCTT AACGAAAGCT TTGCAACATT CATGGCAACA AAGTTTGTTG ACAAATTCTA TCCTGAATGG AATTTGTGGG ATCAATTCAT TGAAGATGCA ATGAATACTG CCATGGGATT AGATGCTCTT AAAACCACTC ATCCAATTGA TGTCAAAGTA AAATCTCCTG CTGAAATTCG AGAAATCTTT GATGCAATAT CTTATGATAA AGGTGGATGC GTTTTGAGAA TGCTTGAACA CTATGTTGGT GAGAAAAATT TCCGAGCCGG TCTCAAAAAA TATCTTTCAG CATTCAAGTA TGGAAATGCC CAAGGACAAG ACTTGTGGGA TGCAATTGGC AAAGCCTCAA AAATGCCAGT AAGCTCTATG GTCAATACGT GGCTAAAACA GCCTGGATTT CCTCAAATTG ATATCACTCA AAATAACAAT GATTTGATAA TTAAACAAAA CCGCTTTTTG ATGGAACCTA CAAAGAAAAC CCAAAAAGGA TTGTGGCATG TCCCAATTAC CTATGGTTTA GGAAAGGAGA CCAAAACAAA ACTATTAACA AAAAAATCTA TGACTGTCAA AGCTCCTAAA GGACCTGGAT TTGTAGCAAA CATTGGTCGT ACTGGATTTT ATCGTGTAAA ATATGATGAT GGAATCTTAC TTGATCTCAA AATGTTAGTT GATCAAAAAC AAATTCCTCA CATTGATAGA TGGGCAATTC AAAATGATTT GTTTGCATTA TGTGTTGCAG GAAAAGAAGA TGTAGAAAAT TACTTGGATT TCTCTGATGC ATATTTTGAT GAAGACTCTT ATCTTCCACA AACAAATGTT GCAAACAATC TAAACTTTTT AGCATCATTA ACTTTCTTTG AGGATTTCAC AGAACAAATC AGAAGTTATG CTATCAATTA CTTTAGAAAG ATTTTATCTA ATCTTGGTTG GGTTCCTCAA AAAACAGACA AACATACTGA TGCATTCATG AGAGGTTATG CAATAACTGT ATTGGGTAAA TTTGGTGATG AACATGTACT TGAGCAGGCA CAAATTAAAT TCAAAGAATT TTTGAAAAAC CCATCATCAC TTCATCCTGA TATTAGAGAA CCTGTTTTCT CAATTATTGC ACGTACTGGT AATGCAAAGA CTCATTCACA ATTTGTAACA TTATACAAAA AAGCAAAAAC AACTGAGGAA AAATTAAGAT TCTTGGGTGC AATGTGCAGT TTCAAGAATG AAAAATTATT GATCAAAACT TTACAATTCT CTCAAACCGC AGAGGTTCGT TCTCAAAACA TGCAATTACC AATCATGAAG ATTGCTGCAA ATCCCTATGG AAAGAAGATT CTTTGGCCTT GGTTAAAGAA GAATTGGGGC AAATTGAGCA AAAAAGTAGG CTATGGTAAT CCTTTGTTTA ATAGAATTGT TGCAAGTATT GCACTAGTTG CAGATGACTC TATGGAAAAA GACATCAAAT CATTTTTCAA ATCTCATCCA ACTCCTGGAA CAGAAAGAAC TCAAGCTCAA ACATTAGAAA AGATACGAAT CCATTCCCGA TTCTTACGCC AAATGAGAAA AGAATTCAAG TAA
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Protein sequence | MDVNPINYEL TFEPDLKKFT FLGTEIITVS CNKAINLITL DCAEIKIKSC TVKSGSKIIK STPKTDEKKE RLSIKLGEKI KGKATIHLEF QGILNDRLLG FYRSQYKQGG KTKYLATTQF EAADARRAFP CWDEPEAKAT FEISIIAENK FTAISNMPVQ SKKKIKNKTL YKFGKTPVVS TYLIYLGVGE FEYLTGKTGK VQIRVVTTKG NKSKGKYSLE LGKKLLTSYE KYFGIKYPLP KLDLIAIPDF AAGAMENWGA ITFRETILLY DPKTSSTRTK QFIAEVISHE IAHQWFGNLV TMKWWNDLWL NESFATFMAT KFVDKFYPEW NLWDQFIEDA MNTAMGLDAL KTTHPIDVKV KSPAEIREIF DAISYDKGGC VLRMLEHYVG EKNFRAGLKK YLSAFKYGNA QGQDLWDAIG KASKMPVSSM VNTWLKQPGF PQIDITQNNN DLIIKQNRFL MEPTKKTQKG LWHVPITYGL GKETKTKLLT KKSMTVKAPK GPGFVANIGR TGFYRVKYDD GILLDLKMLV DQKQIPHIDR WAIQNDLFAL CVAGKEDVEN YLDFSDAYFD EDSYLPQTNV ANNLNFLASL TFFEDFTEQI RSYAINYFRK ILSNLGWVPQ KTDKHTDAFM RGYAITVLGK FGDEHVLEQA QIKFKEFLKN PSSLHPDIRE PVFSIIARTG NAKTHSQFVT LYKKAKTTEE KLRFLGAMCS FKNEKLLIKT LQFSQTAEVR SQNMQLPIMK IAANPYGKKI LWPWLKKNWG KLSKKVGYGN PLFNRIVASI ALVADDSMEK DIKSFFKSHP TPGTERTQAQ TLEKIRIHSR FLRQMRKEFK
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