Gene Nmar_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0947 
Symbol 
ID5773241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand+ 
Start bp824040 
End bp824642 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content37% 
IMG OID641316586 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001582281 
Protein GI161528455 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.244959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTCA CGAACATATT GATCGCAAAA AAATCAGAAT TTAACGTGAT CCATATATTG 
AACAGACCAA CAGAATTGGT ATTGAGTACT TTTGAGAGAC CAAACTGGGA CGAATATTTT 
ATGCTACAAG CAGAACTTGC TAAGCTACGT TCAAACTGCA TCACAAGACA AGTTGGAGCA 
GTAATTGTGA GAAATCACAG ACAGTTAGCA ACAGGGTACA ACGGGACACC TCCGGGAATC 
AAAAATTGTT TTGATGGAGG TTGTAAGAGA TGCCAATTGA GAATGGAAGG AAAAATAGAA 
TCAGGTGCAT CACTTGACAG ATGTCTATGT AACCACGCAG AAGCCAATGC AATAATGCAT 
TGTGCAATAC TAGGAATTGA AGCAGGTATA GAAGGAGCAG TTCTGTATAC GACATTTGTT 
CCATGCCTAG AATGCACCAA AATGGCAATA ACAATAGGAA TTAGAAAATT TGTATGCCTT 
GACTCTTATC CAGAAACAGA CTTTGATTTG CTAAAAGAAG CAGGAGTAGA AGTCATACAA 
TTAGATAAAG CAAAAATTGC AAAATGGGCT CAAGAACTAG TTAACAAATA CAATTCTGGA 
TGA
 
Protein sequence
MLFTNILIAK KSEFNVIHIL NRPTELVLST FERPNWDEYF MLQAELAKLR SNCITRQVGA 
VIVRNHRQLA TGYNGTPPGI KNCFDGGCKR CQLRMEGKIE SGASLDRCLC NHAEANAIMH 
CAILGIEAGI EGAVLYTTFV PCLECTKMAI TIGIRKFVCL DSYPETDFDL LKEAGVEVIQ 
LDKAKIAKWA QELVNKYNSG