Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0938 |
Symbol | |
ID | 5774213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 818620 |
End bp | 819510 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641316577 |
Product | UbiA prenyltransferase |
Protein accession | YP_001582272 |
Protein GI | 161528446 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.22173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCAG TATGGTTTAG GGTTATTCGA ATTCGCTTTC TTTTGGCGTC AGTAATTGCA GTATCTGTTG GTCTTGCTCT AAATTGGTGG CAAAATTCAA CCATTGAACC GTTTGATGCA TTTTTGACTT TTGCAGGAGT TATGGCATTA CATGCTAGTG TTGATTTGCT AAATGATTTT TGGGATTTTA AACGTGGTAT AGATGCCAAA ACCCCAAAAA CAAAGATGAG TGGTGGAACA GGTGTTTTAC CTGAAGGATT ACTCAAACCA TCTAGTGTTT ATCGTGCAGG AATTGCATTT TTGGTAATAG GCTCTGCAAT TGGTGCATAT TTTGTAATTA CTGATGGAAT AATCATTGCA GTCATTCTTG GTTTTGCAAT ATTATCCATC TACTTTTACT CTACAAAAAT TGTTGATTCT GGATTAGGTG AATTTTTTGT TGCAGTAAAA GGTTCTATGA TTGTACTTGG TACTTTCTTC ATTCAATCTG GACAAATTAC TGTGGAATCC ATTCTTGCAG GAATTGTGGT AGGTTCGCTG TCTTCTCTAG TGTTATTCAT TGCATCATTT CCTGATCATG ATGCTGACAA GTCAAAAGGA AGAAAAACGT TAGTTATTGC AGTTGGCAAG CAAAAGGCAA CAAAACTATT TTGGATATTT CCTATTGTTT CTTATTGTGT AATAATTTTG GGAGTATCTT TGAATCTATT TCCAACAATC ACTTTGGTTA CCTTTCTTAG CGTTCCTCTT GTAATAAAAT CTGGATTTGG TTTGAAAAAG ACTTATGATT CTGTTGAAAA ACTAGTTCCT TTCATGTCCT CCACCTTGAT GTTTAGCAGA ATTACTGGTG CACTGTTTGT CCTGAGTTTT TTGATTGGCA TTACAGTTTA A
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Protein sequence | MLSVWFRVIR IRFLLASVIA VSVGLALNWW QNSTIEPFDA FLTFAGVMAL HASVDLLNDF WDFKRGIDAK TPKTKMSGGT GVLPEGLLKP SSVYRAGIAF LVIGSAIGAY FVITDGIIIA VILGFAILSI YFYSTKIVDS GLGEFFVAVK GSMIVLGTFF IQSGQITVES ILAGIVVGSL SSLVLFIASF PDHDADKSKG RKTLVIAVGK QKATKLFWIF PIVSYCVIIL GVSLNLFPTI TLVTFLSVPL VIKSGFGLKK TYDSVEKLVP FMSSTLMFSR ITGALFVLSF LIGITV
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