Gene Nmar_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0938 
Symbol 
ID5774213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp818620 
End bp819510 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content35% 
IMG OID641316577 
ProductUbiA prenyltransferase 
Protein accessionYP_001582272 
Protein GI161528446 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.22173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCAG TATGGTTTAG GGTTATTCGA ATTCGCTTTC TTTTGGCGTC AGTAATTGCA 
GTATCTGTTG GTCTTGCTCT AAATTGGTGG CAAAATTCAA CCATTGAACC GTTTGATGCA
TTTTTGACTT TTGCAGGAGT TATGGCATTA CATGCTAGTG TTGATTTGCT AAATGATTTT
TGGGATTTTA AACGTGGTAT AGATGCCAAA ACCCCAAAAA CAAAGATGAG TGGTGGAACA
GGTGTTTTAC CTGAAGGATT ACTCAAACCA TCTAGTGTTT ATCGTGCAGG AATTGCATTT
TTGGTAATAG GCTCTGCAAT TGGTGCATAT TTTGTAATTA CTGATGGAAT AATCATTGCA
GTCATTCTTG GTTTTGCAAT ATTATCCATC TACTTTTACT CTACAAAAAT TGTTGATTCT
GGATTAGGTG AATTTTTTGT TGCAGTAAAA GGTTCTATGA TTGTACTTGG TACTTTCTTC
ATTCAATCTG GACAAATTAC TGTGGAATCC ATTCTTGCAG GAATTGTGGT AGGTTCGCTG
TCTTCTCTAG TGTTATTCAT TGCATCATTT CCTGATCATG ATGCTGACAA GTCAAAAGGA
AGAAAAACGT TAGTTATTGC AGTTGGCAAG CAAAAGGCAA CAAAACTATT TTGGATATTT
CCTATTGTTT CTTATTGTGT AATAATTTTG GGAGTATCTT TGAATCTATT TCCAACAATC
ACTTTGGTTA CCTTTCTTAG CGTTCCTCTT GTAATAAAAT CTGGATTTGG TTTGAAAAAG
ACTTATGATT CTGTTGAAAA ACTAGTTCCT TTCATGTCCT CCACCTTGAT GTTTAGCAGA
ATTACTGGTG CACTGTTTGT CCTGAGTTTT TTGATTGGCA TTACAGTTTA A
 
Protein sequence
MLSVWFRVIR IRFLLASVIA VSVGLALNWW QNSTIEPFDA FLTFAGVMAL HASVDLLNDF 
WDFKRGIDAK TPKTKMSGGT GVLPEGLLKP SSVYRAGIAF LVIGSAIGAY FVITDGIIIA
VILGFAILSI YFYSTKIVDS GLGEFFVAVK GSMIVLGTFF IQSGQITVES ILAGIVVGSL
SSLVLFIASF PDHDADKSKG RKTLVIAVGK QKATKLFWIF PIVSYCVIIL GVSLNLFPTI
TLVTFLSVPL VIKSGFGLKK TYDSVEKLVP FMSSTLMFSR ITGALFVLSF LIGITV