Gene Nmar_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0847 
Symbol 
ID5774219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp747236 
End bp747811 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content35% 
IMG OID641316485 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001582181 
Protein GI161528355 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value9.47879e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACATATT CAAAAAAACC CCTTGTTGGA ATCATAATGG GTTCTAGTTC GGATTCTAGA 
ATAATGAAAG GAGCAGCTGA AATTCTTGAT GATTTTAAAG TAAAGCATGA AGATCAAATT
ATTTCAGCAC ACAGAACTCC AGCTAGATTG GCAGAGTATG CACAACATGC AGAAAAGATG
GGTTTTGATA TAATCATTGC AGGTGCTGGT GGAGCAGCAC ATCTTCCAGG TATGATTGCA
TCACATACAG TCATTCCAGT AATCGGCGTA CCAATACTAG TTTACAATGA CAAACACCAC
AAAAAAACAG ATACTGAAAA ATTTTCAGCA TTTGGAGGAT TGGATTCATT GTTGTCTATT
ACTGAAATGC CCTCGGGATC TCCTGTAGTT GCAGTAGGAG TAAACAAAGC AGGTAATGCA
GGAATTTATG CAATGAAAAT TTTAGCAAAC AAATTCCCAG AACTCAAAAA GAAACTAAAA
CAACATAAAT CTAATCAACA TGAATCAGTT GTTAAAGAAT CAGAAATGAT GAAGAAACAA
GGATTATCTT CTTTTGCTAA AAAGAAATTC AAATAA
 
Protein sequence
MTYSKKPLVG IIMGSSSDSR IMKGAAEILD DFKVKHEDQI ISAHRTPARL AEYAQHAEKM 
GFDIIIAGAG GAAHLPGMIA SHTVIPVIGV PILVYNDKHH KKTDTEKFSA FGGLDSLLSI
TEMPSGSPVV AVGVNKAGNA GIYAMKILAN KFPELKKKLK QHKSNQHESV VKESEMMKKQ
GLSSFAKKKF K