Gene Nmar_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0843 
Symbol 
ID5774184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp744462 
End bp745130 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content29% 
IMG OID641316481 
Productnucleotidyl transferase 
Protein accessionYP_001582177 
Protein GI161528351 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000793597 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAGCAA TTATTTTAGC TGGAGGTCGT GGAAAGCGAC TAAAACCTGT AACAGATTAT 
GTCCCAAAAC CACTTGTTCC AATAAAGAAT ATTCCAATAA TAGAATGGCA AATCAGGTAT
CTCAAAAAAT TTGGAATTAA AGAAGTCATT ATTTGCACAG GTTACAAAAC AGAGATGATT
GAGAATCACT TGAACATGAA AGATATTGGA ATCAAAATAA AATTCTCTAT TGAAAAGACA
CCACTAGGTA CTGGTGGAGC CATAAAAAAA GCAGGAAAGA TGATCAATGA AAAATCATTT
TTTGTGTTAA ATGGAGATAC AATTACAAAC ATTGATTTAA AAAAATTACA AAAAAAGAAA
AATGCAATTG CAGCAATTGA ATTAAGAACA AAATATGGCA TATTGGAAAC TGATGATGAT
AAGATCCTAA ATTTTAGAGA GAAAAAAGAA ATTTCAGACA CATGGATGAA TGCAGGAATT
TATCATCTAG AAAAAACAGT TCTAAAAGAA CTCCCTGATA AAGGAGACAT TGAAAAAACA
GTTTTCCCAA AATATGCAAA AAAAGGTACT CTGAACACTG TTAAATTCAA AAATACAAAA
TGGTATTCTG TAGATTCATT CAAAGATATG GAAGAATGCG CATTAGAAAT AGAGAAAATA
ATAAAATAG
 
Protein sequence
MKAIILAGGR GKRLKPVTDY VPKPLVPIKN IPIIEWQIRY LKKFGIKEVI ICTGYKTEMI 
ENHLNMKDIG IKIKFSIEKT PLGTGGAIKK AGKMINEKSF FVLNGDTITN IDLKKLQKKK
NAIAAIELRT KYGILETDDD KILNFREKKE ISDTWMNAGI YHLEKTVLKE LPDKGDIEKT
VFPKYAKKGT LNTVKFKNTK WYSVDSFKDM EECALEIEKI IK