Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0843 |
Symbol | |
ID | 5774184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 744462 |
End bp | 745130 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 641316481 |
Product | nucleotidyl transferase |
Protein accession | YP_001582177 |
Protein GI | 161528351 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0000793597 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAAGCAA TTATTTTAGC TGGAGGTCGT GGAAAGCGAC TAAAACCTGT AACAGATTAT GTCCCAAAAC CACTTGTTCC AATAAAGAAT ATTCCAATAA TAGAATGGCA AATCAGGTAT CTCAAAAAAT TTGGAATTAA AGAAGTCATT ATTTGCACAG GTTACAAAAC AGAGATGATT GAGAATCACT TGAACATGAA AGATATTGGA ATCAAAATAA AATTCTCTAT TGAAAAGACA CCACTAGGTA CTGGTGGAGC CATAAAAAAA GCAGGAAAGA TGATCAATGA AAAATCATTT TTTGTGTTAA ATGGAGATAC AATTACAAAC ATTGATTTAA AAAAATTACA AAAAAAGAAA AATGCAATTG CAGCAATTGA ATTAAGAACA AAATATGGCA TATTGGAAAC TGATGATGAT AAGATCCTAA ATTTTAGAGA GAAAAAAGAA ATTTCAGACA CATGGATGAA TGCAGGAATT TATCATCTAG AAAAAACAGT TCTAAAAGAA CTCCCTGATA AAGGAGACAT TGAAAAAACA GTTTTCCCAA AATATGCAAA AAAAGGTACT CTGAACACTG TTAAATTCAA AAATACAAAA TGGTATTCTG TAGATTCATT CAAAGATATG GAAGAATGCG CATTAGAAAT AGAGAAAATA ATAAAATAG
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Protein sequence | MKAIILAGGR GKRLKPVTDY VPKPLVPIKN IPIIEWQIRY LKKFGIKEVI ICTGYKTEMI ENHLNMKDIG IKIKFSIEKT PLGTGGAIKK AGKMINEKSF FVLNGDTITN IDLKKLQKKK NAIAAIELRT KYGILETDDD KILNFREKKE ISDTWMNAGI YHLEKTVLKE LPDKGDIEKT VFPKYAKKGT LNTVKFKNTK WYSVDSFKDM EECALEIEKI IK
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