| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0808 |
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| Symbol | rpl4lp |
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| ID | 5773846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 713528 |
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| End bp | 714343 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316446 |
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| Product | 50S ribosomal protein L4P |
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| Protein accession | YP_001582142 |
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| Protein GI | 161528316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.493543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CAGCAGTATA TACAACAACT GGAACAAAAG ATGGCGAAGT AGAGTTACCA
GCAGTATTTT CTACACCATT TAGAAGAGAA TTAATTCACA AAGCTTTCAC TAATCTTACA
TCACACAAAT TCCAACCACA AGGAAGACAC CCAACTGCAG GACAAGATGT AGTTGCAGAC
TCTAACGATC CACCAACAGG TCAAGGTGTA TCTCGTGTTG CTAGAGCACA AGGTGGAGGT
GGTGGAAGAC AAGGACAAGG TGCAGAAGTT GCATCAACTA GAGGAGGAAG ACAAGCACAC
CCACCTATTG TTGAGAAAGT AATCTACAAA AAATTAAACA AAAAAGAAAA GAAACTAGCA
TTATGTTCTG CAATTGCTGC AACTGCATCA AAAGATAGAG TTGAATCAAG AGGACATAAA
GTAGAAGGAA TAGAATCATT CCCAATTGTA GTTTCAGATG ATATTGAATC AGTATCTAAA
ACAAGCGAAG TATCCAAAAT ACTTGATTCA TTAAAACTAA CACAAGATGT ACAAAGATTA
GAAACAAGAA AAGCACGTTC TGGACAATCA AGACTTAGAG GAAGAAGTAA GAAAGTTGGA
AAAAGTGTAT TGTTTGTAAC AAAAGATGCA TCAAATATTT CAAAAGCAAT TGGTGCACTA
CCAGGTGTAG AGGCAACAAG TGTCAAAGAT TTGAGCGTAT TAGACTTAGC TCCGGGTTCA
GACCCAATTA GATTAACCGT TTATTCCAAA TCTGCAATTG AAGAGATTGG AAAAATAAAA
TCAACACATC TAGAGGTAAT GGCGAAAGTA CAATGA
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| Protein sequence | MTKTAVYTTT GTKDGEVELP AVFSTPFRRE LIHKAFTNLT SHKFQPQGRH PTAGQDVVAD
SNDPPTGQGV SRVARAQGGG GGRQGQGAEV ASTRGGRQAH PPIVEKVIYK KLNKKEKKLA
LCSAIAATAS KDRVESRGHK VEGIESFPIV VSDDIESVSK TSEVSKILDS LKLTQDVQRL
ETRKARSGQS RLRGRSKKVG KSVLFVTKDA SNISKAIGAL PGVEATSVKD LSVLDLAPGS
DPIRLTVYSK SAIEEIGKIK STHLEVMAKV Q
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