Gene Nmar_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0807 
Symbol 
ID5773843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp713265 
End bp713531 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content34% 
IMG OID641316445 
Product50S ribosomal protein L25/L23 
Protein accessionYP_001582141 
Protein GI161528315 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.563432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAG ATCAAGCAAG TAAAATCATA CTCAAACCAT ACATTACTGA AAAGACATTT 
GCAATGGTAG AAAATGAAAG TAAGATTTGT TTCATAGTAG AGAGATCAGC AAGCAAACCA
GAAATTTCTG AAGCAGTTAA CACATTATAC AATGAAAAAG TCCTGAACGT CAACACAGCA
AGAACCATTT ACGGTAAGAA AGCATTTGTC CAGTTCGAAA ATACAGAAAA AGCAAGAGAC
CTCGCAACAA AGATAGGAAT GCTATAA
 
Protein sequence
MNVDQASKII LKPYITEKTF AMVENESKIC FIVERSASKP EISEAVNTLY NEKVLNVNTA 
RTIYGKKAFV QFENTEKARD LATKIGML