| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0592 |
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| Symbol | |
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| ID | 5773619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 528167 |
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| End bp | 529426 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316226 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001581926 |
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| Protein GI | 161528100 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTAA ACATAGACTC ACTTTTTAAA AATGCAGATC CAGTTGTATC AGAAATTCTA
AACCGGGCAC TATCAGAAAA AGAGATTACA TCAAAAGAAG GATTAGAGTT GTACGATACA
TCAGGTATTG ATTTTCACCT AGTAGGATTA GTTGCAGATG AGCTAAGAAA GAGAAGGGTA
GGAGATGTTG TATCTTACGT AGTAAACAGG AACATCAATT TTACTAATGT CTGCATAAAA
CAATGTGGAT TTTGTGCATT TAGCAGAGAC TTTAGAGAAG AAGAAGGGTA TTTTCTTCCA
ACAGAAGAAA TCGTACGCAG AGCAAAGGAA GCACATCAAC TAGGAGCAAC AGAAGTTTGC
GTCCAAGCAG GTCTTCCACC AGACATGGAA GGAGATGTTT ATGAAAACAT TTGCAGAGAG
ATCAAAAAAG AGGTTCCAGA TATCCACATT CATGGATTCT CACCTGAAGA GATTCTCTAT
GGCGCAACAC GTTCAGGAGT AGAAATAGAA GAATTTCTAA AACGAATGAA GGAAGCAGGA
GTAGATACAC TCCCAGGAAC ATCTGCAGAG ATTTTAGACC AAGAACTCAG AGACAAGATT
TCACCAGGCA GAATAAGTGT AAAAGATTGG GAGAGAGTCA TCAAAAATGC CCACAAAATG
GGAATAAACA CAACATCAAC TATGATGTTT GGACATTTGG AATCACAAGA AGACAGAGTC
AAACACATTG AGAAATTAAG AGATATTCAA AAAGAGACAG GAGGGTTTAC AGAATTTGTT
CCACTTAACT TTATTCATAC AGAAGCACCA ATGTACAAAC ATCAATTACA TGAAGGAATC
AAACAAGGAG GTAGTGGAAA TGATGTCTTA CTCACTCATG CAATTGCAAG AATAATGCTG
AATAATCACA TCAATAACAT ACAAATGTCT TGGGTTAAAG AGGGACAAAA AATGTCTCAA
TTATTGTTAA TGTGGGGAGC TAATGACTTT GGAGGAACTT TGATTAACGA GAGTATTTCG
ACTTCTGCAG GTTCAGAGCA CGGACAATTG TTAAAACCAA AAGAAATCAG ACGCATGATA
AGAGAAATTA AAAGAATTCC AGCAGAAAGG AACACAAAAT ATGAAATATT GCGAAAATTT
GAAGATGACA CAGAGCACGA AGACGAATTA GACAAGATTT CAAACACATC ACAGTTTGGA
TCATATACTG AATTGATTAA GATAAACAAA TTCAATTATG AAAACCCAAG GAGAAAATAA
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| Protein sequence | MTLNIDSLFK NADPVVSEIL NRALSEKEIT SKEGLELYDT SGIDFHLVGL VADELRKRRV
GDVVSYVVNR NINFTNVCIK QCGFCAFSRD FREEEGYFLP TEEIVRRAKE AHQLGATEVC
VQAGLPPDME GDVYENICRE IKKEVPDIHI HGFSPEEILY GATRSGVEIE EFLKRMKEAG
VDTLPGTSAE ILDQELRDKI SPGRISVKDW ERVIKNAHKM GINTTSTMMF GHLESQEDRV
KHIEKLRDIQ KETGGFTEFV PLNFIHTEAP MYKHQLHEGI KQGGSGNDVL LTHAIARIML
NNHINNIQMS WVKEGQKMSQ LLLMWGANDF GGTLINESIS TSAGSEHGQL LKPKEIRRMI
REIKRIPAER NTKYEILRKF EDDTEHEDEL DKISNTSQFG SYTELIKINK FNYENPRRK
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