Gene Nmar_0560 details

Gene Information

• Locus tag: Nmar_0560
• ID: 5773681
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 501721
• End bp: 502185
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641316193
• Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
• Protein accession: YP_001581894
• Protein GI: 161528068
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.26632
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTGAAG AAGGAGAAAA GGTTCCAAAA TTCGAAGTCA GTGATTCCAA TGGAAATAAA 
GTAAAATCAT CAGATTTTAA AGGTAAAAAG CATGTCATCT ATTTTTATCC AAAAGATTTC 
ACTCCAGGAT GTACAACTGA GGCAGATGAA TTTGCAAAAG ACTACAAAAA ATTTCAAAAG 
GAAGGAATTG AAATTGTGGG AGTCAGTCCT GACGATGTGG ATTCACACAA AAAATTCTGT 
GACAAAATGG GAATCAAATT TCCACTATTA GCAGATGTGG ATAAAGAGAT TTCAAAATCA 
TTTGGGGTTT GGGGTTTAAA GAAATTCATG GGTAGAGAGT ACATGGGAGT TATGAGAAGC 
ACTTTTCTTG TAGATGAAAA AGGAAAAATT TTCAAAATAT ATCCCAAAGT AAAACCGGCA 
GGACATTCCA AACAAGTGTT TGAAGATTTT AAAAATTTAG AATAA 

 

Protein sequence

MIEEGEKVPK FEVSDSNGNK VKSSDFKGKK HVIYFYPKDF TPGCTTEADE FAKDYKKFQK 
EGIEIVGVSP DDVDSHKKFC DKMGIKFPLL ADVDKEISKS FGVWGLKKFM GREYMGVMRS 
TFLVDEKGKI FKIYPKVKPA GHSKQVFEDF KNLE