| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0500 |
|---|
| Symbol | |
|---|
| ID | 5773504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 449827 |
|---|
| End bp | 451053 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641316132 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_001581834 |
|---|
| Protein GI | 161528008 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATAATA GAAAAGGCGT GAAGGTACTC ACACTAGATG ATTTTGATTT AAAAGGTAAA
ACTGTTTTTT TAAGAGTGGA CATGAACTGT CCAATCGACC CAGAAACAAT GGAGATTTCA
GGGACTAAAA GAATTGAAGA AGCCATAGAA ACACTACAAT CACTAAAAGA TGCCAAAGTA
GTTGTTGCAT CACATCAGGG AAGAGTTGGA AATAATGATT ATACTGGAAT GGACAAACAT
GCAAAAGTTC TTGAAAAATT AATGAATCGT GAAATAAAAT ATGTTGAAGA CGTAATTGGA
GAAGCTGCAC AAAATGCAAT TAAAAATTTA GAAGATGGAG ACATCCTACT TTTAGACAAT
CTCAGATTAT GTGCTGAAGA AAATTATGAG TTCACCCCTG AGAATGCATC TAAAACAATC
ATGGTTACTC GATTAGCAAA GTTGTTTGAT CTATGTGTGT TAGATTCATT TCCTAGTGCA
CACAGATCAC ACCCATCAAT CGTTGGATTC CCACAAGTAC TACCTGCATG TGCAGGAAGA
ATTGTAGAAA GAGAAGTCAG AAACCTAGAT GAAATCATGA CTGTGGCAAA AGCACCACAT
GTAATAGTCT TAGGAGGATC CAAAGTTCCA GATAGGCTTG AGGCAATCAA ATTACTTATT
CAAAACGGTA GAGCAGATCA CGTCTTACTA ACAGGATTAA TTGGAAATGT GTTCATGCGA
GCACAAGCCA GAGTAAAATC ATCACTTGGA ATCAAAAGAG AAGAAGAAGT TGTTGCAAAA
GCTCACACAT TGATAGGAGA ACATCCAGAT GTATTTGCAA CACCAGTGGA CATTGCAATT
GACAAAGATG GTGAAAGAGT AGAGATGGAT GTAAGAGAGA TGGGTAAAGG AGATAAGATT
TTTGATTTAG GTCCAAAAAC TGTAGAATAT TATTCAAAAT TAATTGCAGG TGCAGGAACT
GTGTTTATCA GTGGACCAGC AGGATTTTTT GAAAAAGAAA ATTTCAGTTA TGGAACAAAA
TCATTATTAA CTGCAGTAGC AAATTCAATG GCAACAACAA TTGTTAGTGG AGGTCACTTG
ACAACCGCAT TAAAACAGCA AGGATTGGCA GAAAAAATTA ATCATATCAG TACTGCAGGT
GGGGCATTAG TTCTCTATCT TACAGGTGAA AAATTGCCAA TGATAAAAGC ATTAGAAGAT
GCTAGAACAA GACACCAATC TAAATAG
|
|---|
| Protein sequence | MHNRKGVKVL TLDDFDLKGK TVFLRVDMNC PIDPETMEIS GTKRIEEAIE TLQSLKDAKV
VVASHQGRVG NNDYTGMDKH AKVLEKLMNR EIKYVEDVIG EAAQNAIKNL EDGDILLLDN
LRLCAEENYE FTPENASKTI MVTRLAKLFD LCVLDSFPSA HRSHPSIVGF PQVLPACAGR
IVEREVRNLD EIMTVAKAPH VIVLGGSKVP DRLEAIKLLI QNGRADHVLL TGLIGNVFMR
AQARVKSSLG IKREEEVVAK AHTLIGEHPD VFATPVDIAI DKDGERVEMD VREMGKGDKI
FDLGPKTVEY YSKLIAGAGT VFISGPAGFF EKENFSYGTK SLLTAVANSM ATTIVSGGHL
TTALKQQGLA EKINHISTAG GALVLYLTGE KLPMIKALED ARTRHQSK
|
|---|
| |