| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0496 |
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| Symbol | |
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| ID | 5774739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 446390 |
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| End bp | 447790 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641316128 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_001581830 |
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| Protein GI | 161528004 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAG AAACACTATC TAAAATTGAT GAATCTCACA TCAATGAAAT CTCTTCATCA
AGAAATGAAC CTGATTGGTT GAAAGATTAC AGAAAAGATT CTCTTTCAAT TTACTCTACT
CTTCCAATTG AGATGTCTCC ACTTTACAAC AAATACACTG ATGCAAAAAG ACTAAATCCT
GAAAAAATAT CCATTGCATC TTCTACCAAA GACACAATTC CAGATTTTCT TCAAAAAAGA
CTAGGTGAAT TAGAAAATGA AATTTGTATT ATTCAAATCG GAACTAACAT TCACAAAATC
AACCTTCCTG ATGATCTAAA ATCTAAGGGA TTAGTGATTT CTTCTATCTC TGATGCAATT
CAAAATAACT CTGAACTTGT AAAAAAAGCC CTAGAGGCAT CAAATTCTAA TGATGACAAG
TTTACAGCCT TGAATAACGC TGCATTTAAC TCTGGAGTTT TTATCCATAT TCCAAAAAAC
TTTGTTTTAG AAAAACCAAT TCACTTCTTG TCTTGTTTGT CTGATGATGG ATTATCTACA
ATCTCTAGAA ATGTGATCTT TGCAGATGAA AGTAGTAAAG CATCCATTGT TCAAGAATTA
TACTCTCCAA AGACTGAAAC TCAACAAGCA TATCTTGAAT TACTCAACAC AAATGTTGCT
GCAAATGCAG AACTAAGCCT TACAACTTTA CAAATGATGG ATCAAAACTC TGTTAACTTT
TCTACTAGGA GAACTGATTT GGCACAAGAC GCTACTGTAA ATTGGTATTC TGGCCTATTT
GGTTCTGTAT TGTCTAGATA CAAAATTGAT TACTATCTTA ATGGAACTGG TGCATCTTCA
AATGAATCTG AAGTTGTATT TGGAAATAAT GATCAACATT TCGATATTCA AACAAACATG
AATCATCAAA GTCCTGCAAC TGAAGCCAGA GTTGTAGAAA AATCTATTCT TAAAAACAGA
TCAAAATCCC TCTTCAAAGG AATGATCAGA ATTAAAGAAA ATGCCGCAAA ATCAAACTCA
TTTTTGTCAG GTCGTTCTAT TCTCTTAGAT AAGAATGCAA AATCTGATGC AATTCCAGGA
CTTGAAATTC TAACAAACGA TGTTAAAGCA ACTCACTCTG CATCTGTTGC ACAAATTGAT
GAAGAACAAA TCTTCTATCT GAAAAGCAGA TGTTTGAGCC ACGAGGAGGC TGAAAGAACT
ATTGTTGAAG GCTTTTTGGA GCCATTATCA AGAAAAATGT CTTTCCAAGT AAGAGCCTGG
ATTGCATATC TTATTGAATC CAAATGGGAA AACCGTGAAT TAACAATTAA CACTGATGAA
GAACTAGCAA AATTCGTTGA GATTGAAGAG ACAAGATACA ACGAAGATGC TGAAATTGAA
CAACACTACA AATACAGATA G
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| Protein sequence | MSQETLSKID ESHINEISSS RNEPDWLKDY RKDSLSIYST LPIEMSPLYN KYTDAKRLNP
EKISIASSTK DTIPDFLQKR LGELENEICI IQIGTNIHKI NLPDDLKSKG LVISSISDAI
QNNSELVKKA LEASNSNDDK FTALNNAAFN SGVFIHIPKN FVLEKPIHFL SCLSDDGLST
ISRNVIFADE SSKASIVQEL YSPKTETQQA YLELLNTNVA ANAELSLTTL QMMDQNSVNF
STRRTDLAQD ATVNWYSGLF GSVLSRYKID YYLNGTGASS NESEVVFGNN DQHFDIQTNM
NHQSPATEAR VVEKSILKNR SKSLFKGMIR IKENAAKSNS FLSGRSILLD KNAKSDAIPG
LEILTNDVKA THSASVAQID EEQIFYLKSR CLSHEEAERT IVEGFLEPLS RKMSFQVRAW
IAYLIESKWE NRELTINTDE ELAKFVEIEE TRYNEDAEIE QHYKYR
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