Gene Nmar_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0495 
Symbol 
ID5774738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp444970 
End bp446370 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content37% 
IMG OID641316127 
ProductFeS assembly protein SufB 
Protein accessionYP_001581829 
Protein GI161528003 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG AAAACCTTGA CATGGATTAT TCAAAATATG ATTTTAAGGA CTCTACAGAA 
ATGTATGTCC ACCTTAGCAA GAAAGGCCTG ACTAAGGAAA CTGTAATCGA AATCAGTAAA
ATGAAAGATG AACCACAATG GATGCTTGAT TTTAGATTAC GTTCTTACGA AGTCTTCATG
AAAAAACCAA TGCCAACTTG GGGTGGAGAT CTTAGTCTAA TTGATTTTCA AAATATCTAC
TATTATGCAA AAGCATCTGA GAAAACAGAA AAGAACTGGG ATGATGTTCC AGAAGATGTC
AAAAACACTT TTGACAAATT AGGAATTCCA GAAGCTGAAA AGAAATTCTT AGCAGGTGTT
GGTGCACAAT ACGAATCAGA AGTTGTATAC CACAGCTTAA GAGAAGATTT AGCAAAACAA
GGTGTTCTCT TTTTAGATAC TGACGCAGCT CTAAAAGAAC ATCCTGAACT TTTCAAAAAA
TACTTTGGAA AAGTTATTCC TCCAGAGGAT AACAAATTCG CAGCACTAAA CAGTGCAGTT
TGGAGTGGTG GCTCATTCAT CTACGTTCCA CCTGGTGTCA AAGTTGACAT GCCACTTCAA
GCATACTTTA GAATTAATGC TGAAAACATT GGTCAGTTTG AAAGAACATT GATTGTTGTT
GATGAAGGTG CAGATGTACA TTACATTGAA GGTTGTACTG CTCCTGTTTA CTCTTCAGAG
TCATTACACT CTGCAGTTGT TGAACTAGTT GCACACAAAG ATGCACATCT AAGATATACA
ACAATCCAAA ACTGGAGTAA CGATGTCTAC AATCTTGTAA CAAAACGTGC TTATGCATAT
GAAGGTGCAA CAGTTGAATG GATTGATGGA AACATTGGAA GTAAACTTAC AATGAAATAT
CCTGGAGTCT ACCTTATGGG CGAACGTGCT TATGGTGAAA CACTATCTAT TGCATTTGCA
GGCAAAGGAC AACACCAAGA CACAGGCGCA AAAATGGTTC ACATGGCACC AAACACTACC
TCTAAAATTA CATCCAAATC CGTAAGCAGA TTGGATGGTC GTTCAACTTA CAGAGGATTA
CTAAATGTAG CAAAAGGTGC TACCAACGTA AAGTCTACTG TAAGATGTGA TGCATTACTC
CTTGATGACA CATCAAAGAC TGATACTTAT CCATACATGG AAATCAATCA AGAAGATGCA
ACAATTACTC ACGAAGCAAC AGTTGGAAAA ATTGGAGATG AACAAATCTT CTATCTGATG
AGTAGAGGAT TTTCTGAAGA AGAAGCATTA TCCCTAATTG TTAATGGTTT CATGGAACCA
TTTACAAAAG AACTTCCAAT GGAATATGCA GTTGAGTTAA ACCGTCTCAT CAAACTTGAG
ATGGATGATT CTGTAGGATA G
 
Protein sequence
MATENLDMDY SKYDFKDSTE MYVHLSKKGL TKETVIEISK MKDEPQWMLD FRLRSYEVFM 
KKPMPTWGGD LSLIDFQNIY YYAKASEKTE KNWDDVPEDV KNTFDKLGIP EAEKKFLAGV
GAQYESEVVY HSLREDLAKQ GVLFLDTDAA LKEHPELFKK YFGKVIPPED NKFAALNSAV
WSGGSFIYVP PGVKVDMPLQ AYFRINAENI GQFERTLIVV DEGADVHYIE GCTAPVYSSE
SLHSAVVELV AHKDAHLRYT TIQNWSNDVY NLVTKRAYAY EGATVEWIDG NIGSKLTMKY
PGVYLMGERA YGETLSIAFA GKGQHQDTGA KMVHMAPNTT SKITSKSVSR LDGRSTYRGL
LNVAKGATNV KSTVRCDALL LDDTSKTDTY PYMEINQEDA TITHEATVGK IGDEQIFYLM
SRGFSEEEAL SLIVNGFMEP FTKELPMEYA VELNRLIKLE MDDSVG