Gene Nmar_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0493 
Symbol 
ID5774728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp443851 
End bp444654 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content35% 
IMG OID641316125 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001581827 
Protein GI161528001 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATG GAAAGACTAT AGCAATCACT CGTTCATCTG ATGATGCTTC TGAATTTATC 
TCTCTTGCAG AACAAACCAA TGCAACACCA ATAGCCTTAC CGACAATTGA ACTTGTTAGT
AAGGGTGAGA AAATTGTTGA TGAGTTTCTG GATTCTGTAG AAACATACAA TCCTGATTAT
TCTGTTTTTA TGAGTTCAAA GGCTGTGAAA CTACTCTTTG ATACTGCAAA AGAATCAGGA
AAACTAGAAA CCCTTCAATT GGCAATTGCA AATACCATTG TAATCTCTGT TGGTCCAAAA
ACAACCATTG CTCTTGAAAC ACAAGGCATC AAAGTTAATC ATCAACCTGA AAAAACATTC
TCTTCTGTAG GTGTTGGAGA ATTATTTACG CAACTCAATG CAGTTGGGAA AAAAGTTATA
GTGCCTAGAA GTGGTGCATC TACACCATTT CTCAAAGAAT TACTAAACAA AATTGGAATA
GATGTATCTG AAATTCATCT CTATGACGTA TGTGCATTTA GAGATACATC TCAATGGAAT
GGATTTAGAG AATTATTCTC ACAAAACAAA GTTGATGGTG TGGTGTTTAC GAGTGCATCC
TCAGTTCGAG GATTCTTTGA GATAATGACT AAAGATTATG ATGAAAATTC TTTATTAGAT
AATCTAGCCA AACTTTCTGT AGTTTCCATC GGACCATTCA CTTCTGATGA ATTAAAGAAA
TTCAAAGTTA AGAATACCGT TGCTGAGGTT CATACTGTTG CGGGTGCCTT TGAAGCAATG
AAAAATACTC TTACCATTGC ATAA
 
Protein sequence
MLDGKTIAIT RSSDDASEFI SLAEQTNATP IALPTIELVS KGEKIVDEFL DSVETYNPDY 
SVFMSSKAVK LLFDTAKESG KLETLQLAIA NTIVISVGPK TTIALETQGI KVNHQPEKTF
SSVGVGELFT QLNAVGKKVI VPRSGASTPF LKELLNKIGI DVSEIHLYDV CAFRDTSQWN
GFRELFSQNK VDGVVFTSAS SVRGFFEIMT KDYDENSLLD NLAKLSVVSI GPFTSDELKK
FKVKNTVAEV HTVAGAFEAM KNTLTIA