Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0493 |
Symbol | |
ID | 5774728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 443851 |
End bp | 444654 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641316125 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_001581827 |
Protein GI | 161528001 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGATG GAAAGACTAT AGCAATCACT CGTTCATCTG ATGATGCTTC TGAATTTATC TCTCTTGCAG AACAAACCAA TGCAACACCA ATAGCCTTAC CGACAATTGA ACTTGTTAGT AAGGGTGAGA AAATTGTTGA TGAGTTTCTG GATTCTGTAG AAACATACAA TCCTGATTAT TCTGTTTTTA TGAGTTCAAA GGCTGTGAAA CTACTCTTTG ATACTGCAAA AGAATCAGGA AAACTAGAAA CCCTTCAATT GGCAATTGCA AATACCATTG TAATCTCTGT TGGTCCAAAA ACAACCATTG CTCTTGAAAC ACAAGGCATC AAAGTTAATC ATCAACCTGA AAAAACATTC TCTTCTGTAG GTGTTGGAGA ATTATTTACG CAACTCAATG CAGTTGGGAA AAAAGTTATA GTGCCTAGAA GTGGTGCATC TACACCATTT CTCAAAGAAT TACTAAACAA AATTGGAATA GATGTATCTG AAATTCATCT CTATGACGTA TGTGCATTTA GAGATACATC TCAATGGAAT GGATTTAGAG AATTATTCTC ACAAAACAAA GTTGATGGTG TGGTGTTTAC GAGTGCATCC TCAGTTCGAG GATTCTTTGA GATAATGACT AAAGATTATG ATGAAAATTC TTTATTAGAT AATCTAGCCA AACTTTCTGT AGTTTCCATC GGACCATTCA CTTCTGATGA ATTAAAGAAA TTCAAAGTTA AGAATACCGT TGCTGAGGTT CATACTGTTG CGGGTGCCTT TGAAGCAATG AAAAATACTC TTACCATTGC ATAA
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Protein sequence | MLDGKTIAIT RSSDDASEFI SLAEQTNATP IALPTIELVS KGEKIVDEFL DSVETYNPDY SVFMSSKAVK LLFDTAKESG KLETLQLAIA NTIVISVGPK TTIALETQGI KVNHQPEKTF SSVGVGELFT QLNAVGKKVI VPRSGASTPF LKELLNKIGI DVSEIHLYDV CAFRDTSQWN GFRELFSQNK VDGVVFTSAS SVRGFFEIMT KDYDENSLLD NLAKLSVVSI GPFTSDELKK FKVKNTVAEV HTVAGAFEAM KNTLTIA
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