Gene Nmar_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0334 
Symbol 
ID5773863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp297421 
End bp298452 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content39% 
IMG OID641315962 
Producthypothetical protein 
Protein accessionYP_001581668 
Protein GI161527842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TGAAAATGAA AGTAGCAAGT ATTTTAGCAA TTACATTATT ATCTATTTCA 
ATTCTATCTT ATGGTGTAAA CAATTCTGCC TTTGCAGCTA ATTCATTCAT TGAAGCATCA
TCCAGCTCTG GAAGTGTTGG CAATGGTGAT CCTCTTGTTA TATCTGGGAG CATTGTAGAC
TATGAAGATG CAGGACACGC ACTTACTTTC CAAATTATAT CTCCTGATAA CAGCATAGTT
CAAATCGGTC AAGTAATGGG TAACATAGGT TCTGATGGTA CATTTGAAAT GAACCTTACT
GCCGGTGGTC CTTTATGGAA AACCGCTGGT GAATACACTG TCAAATTTTT CTATGGTCCT
ACTAAAGGTG ATGCTACAGT AAATTATGCT GGTGGTGATA CGCCTTCTAC CCCAGAACCA
ACTGCACCAG AACCAGAACC AGAACCAACT GCACCAGAAC CAGAACCAGA ACCAACTGCA
CCAGAACCAG AACCAGAACC AACTGCACCA GAACCCGAAC CAATAACCTG TGGAGCTGGA
ACTGAAATGG TTAATGGTAT TTGTCAAGTC ATTGCTGAAC CAGAACCCGA ACCAGAACCA
CAATGTCCAG CAGGATACTC ATTCCGTGAT GGAGTATGTG TTGAAGATGG TGGTGGTTGT
CTTATTGCAA CTGCAGCATA TGGAACTGAA TTAGCACCTC AAATTCAATT ACTTAGAGAA
GTTAGAGATA ACACTGTATT ATCCACTGCT TCTGGAGCTA CATTTATGAC TGGATTTAAC
ACATTATACT ATTCATTTGC CCCAACTGTT GCTGATTGGG AAAGAGAAAA TCCTATGTTT
AAAGAATCAG TTAGAGCATT CATCACACCA ATGATTTCAA CATTGTCTAT TATGACATTG
GCTGACGATG GTTCAGAAGT TGAAGTATTA GGATTAGGAA TCTCTGTTAT TGCACTTAAT
TTAGCAATGT ACATTGCAGC ACCTGCATTA ATTGGATTCA AAGTCCACAA ATCACTCAAA
TCTAGAAAAT AA
 
Protein sequence
MKKMKMKVAS ILAITLLSIS ILSYGVNNSA FAANSFIEAS SSSGSVGNGD PLVISGSIVD 
YEDAGHALTF QIISPDNSIV QIGQVMGNIG SDGTFEMNLT AGGPLWKTAG EYTVKFFYGP
TKGDATVNYA GGDTPSTPEP TAPEPEPEPT APEPEPEPTA PEPEPEPTAP EPEPITCGAG
TEMVNGICQV IAEPEPEPEP QCPAGYSFRD GVCVEDGGGC LIATAAYGTE LAPQIQLLRE
VRDNTVLSTA SGATFMTGFN TLYYSFAPTV ADWERENPMF KESVRAFITP MISTLSIMTL
ADDGSEVEVL GLGISVIALN LAMYIAAPAL IGFKVHKSLK SRK