Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0316 |
Symbol | rps2P |
ID | 5774581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 279341 |
End bp | 279964 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641315943 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001581650 |
Protein GI | 161527824 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01012] ribosomal protein Sa(cytosolic)/S2(archaeal) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC AAGCAGAAAC AACAGACATC AAAAAGAAGA TCCTATCTAC AGGAATCAGA GTGGGTACAC AAGTTAAAAC AAAATTCATG AGACCATTCA TCACCAAGGC TAGCCCAGAA GGACTTTACA TGCTTGATTT GGATATCACA CTGGACAAAA TTAAGACTGC TGCTAAATTC ATCAACAGAT TAGGTGTAGA GAATCTTATT GTATGCTCAG GCAGACAATA TGCAGAAACA CCAATTGAAA AATTCTGTGA AACATTAGGT TCAAAGAAAT TACTTGGAAG ATTTATGCCA GGAACTCTAA CAAACCCATC ATTACCATAT TACATTGAAC CAAAATTGGT TTTAATTTCC GATCCTCAAG TTGACGAACA AGCAATTACT GAAGCAACTA ATGCAGGCAT TCCAGTAATC GGAATTGCAA ATACAGATAA TATTACATCA AATCTAGATG TAATCATACC AGCAAACAAC AGAGGAAGAA AAGCGCTAGC TACAGTTTAC TGGTTATTGG TACGTCAAAT TCTCATTGAA AAAGGAGAAC TAAAAGAAGA AGACCCAATG AATATTGAAA TTGATGATTT TGAAACAAAG ATTACCGAAG AGGAAATCGA ATAA
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Protein sequence | MSQQAETTDI KKKILSTGIR VGTQVKTKFM RPFITKASPE GLYMLDLDIT LDKIKTAAKF INRLGVENLI VCSGRQYAET PIEKFCETLG SKKLLGRFMP GTLTNPSLPY YIEPKLVLIS DPQVDEQAIT EATNAGIPVI GIANTDNITS NLDVIIPANN RGRKALATVY WLLVRQILIE KGELKEEDPM NIEIDDFETK ITEEEIE
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