| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0313 |
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| Symbol | |
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| ID | 5773916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 276953 |
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| End bp | 277603 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641315940 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_001581647 |
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| Protein GI | 161527821 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.814228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG AATTTGTTAT CTTAGTAGAT GAAAACGATA ATCCGATTGG AAAAGAAGAG
AAAGTAAAAT GTCATTTGCC AAATGGAAAA CTACACAGAG CATTTACTGC ATTATTGTTT
GATGATAGTG GAAGACTGGT ACTAACAAGA AGGGCAAAAG AAAAAATGTT ATGGCCAGGA
GATTGGGATG GAACATTTGC AAGCCATCCT AGAGAATCAG AAACTTATGT CTCATCAGGT
GAAAGAAGAA TGCCTGAAGA ATTAGGTATT GAAGGAAAAT TAGATTATTT ACACAAATTC
GAATATCATG TGCCATACAA AGATGTAGGT TCAGAAAATG AAATTTGTGG AACATTAATT
GGAGTAATTG ACAAATCGAC AGAACTAAAA GAGATTGAAG GCGAGATAGA CGAAATAAAA
TGGAGTTCAG CTGATGAATT ACTTTCAGAA ATCAAAACAA AACCTGAAAT TTATTGTCCA
TGGATGTTAA TTGCATTAGA ATTACTTGAA AAATCAGATA AATCTGTGCT TGAAAAACAT
GCAAATATCT TATCTACATG GATGACGAAT GAGGTTCATG AAGGATTGCA AAATGCAATC
AAAACACATT TGCCAGAAGA AAAATGGAGA TTAGTAAATG AAAAAAACTA A
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| Protein sequence | MAEEFVILVD ENDNPIGKEE KVKCHLPNGK LHRAFTALLF DDSGRLVLTR RAKEKMLWPG
DWDGTFASHP RESETYVSSG ERRMPEELGI EGKLDYLHKF EYHVPYKDVG SENEICGTLI
GVIDKSTELK EIEGEIDEIK WSSADELLSE IKTKPEIYCP WMLIALELLE KSDKSVLEKH
ANILSTWMTN EVHEGLQNAI KTHLPEEKWR LVNEKN
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