Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0289 |
Symbol | |
ID | 5774291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 256122 |
End bp | 256727 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641315914 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_001581623 |
Protein GI | 161527797 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0000476622 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAATTTG TAAAAGAGTT TGCAACCTTT TTGCATCAAA AGGGCATCAT AAAATTTGGA GATTTTACAC TAGCCAGTGG AAAAAAGAGT TCATACTATG TAGATCTAAG ACTAGTTCCA AGTTATCCTC AAGAATTTAG GAAAATGGTC AAATATCTAG AAAATGAGAT TGCGCAAAAT ATAGGATTAG ACAAGTTTGA TTCAATAGTT TCAGTACCTA CAGGAGGTTT GGTTATTGCA TCAGCACTGG CAATTGAAAC AGTAAAACCA TTGATCTATG TTAGAAGTAA ACCAAAAGAT TATGGAACTT CAAAATCAGT TGAAGGTAAA ATTCATGATG GAATGCAAGT AGTTATGATA GATGATGTTG CAACAACAGG AGGTTCTGTT GTGAATGCAA TCAAGTCATT AAAAGAAGTC AACATTTCAG TAAAAGATGC TTATGTGATT GTAAACAGAA TGGAGGGAGC AGATGAAGCC TTGAATGAAT TAGATGTAAA AATGCATTCA ATTCTGAATA TTTTACAAAT TACAGAAGCA TTACATGAAC AGAATCTAGT AGATGACGAG ATTTTGGAAA AAGTGAAAAA TCAAATTGCT AAATAA
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Protein sequence | MEFVKEFATF LHQKGIIKFG DFTLASGKKS SYYVDLRLVP SYPQEFRKMV KYLENEIAQN IGLDKFDSIV SVPTGGLVIA SALAIETVKP LIYVRSKPKD YGTSKSVEGK IHDGMQVVMI DDVATTGGSV VNAIKSLKEV NISVKDAYVI VNRMEGADEA LNELDVKMHS ILNILQITEA LHEQNLVDDE ILEKVKNQIA K
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