Gene Nmar_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0289 
Symbol 
ID5774291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp256122 
End bp256727 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content32% 
IMG OID641315914 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001581623 
Protein GI161527797 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000476622 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATTTG TAAAAGAGTT TGCAACCTTT TTGCATCAAA AGGGCATCAT AAAATTTGGA 
GATTTTACAC TAGCCAGTGG AAAAAAGAGT TCATACTATG TAGATCTAAG ACTAGTTCCA
AGTTATCCTC AAGAATTTAG GAAAATGGTC AAATATCTAG AAAATGAGAT TGCGCAAAAT
ATAGGATTAG ACAAGTTTGA TTCAATAGTT TCAGTACCTA CAGGAGGTTT GGTTATTGCA
TCAGCACTGG CAATTGAAAC AGTAAAACCA TTGATCTATG TTAGAAGTAA ACCAAAAGAT
TATGGAACTT CAAAATCAGT TGAAGGTAAA ATTCATGATG GAATGCAAGT AGTTATGATA
GATGATGTTG CAACAACAGG AGGTTCTGTT GTGAATGCAA TCAAGTCATT AAAAGAAGTC
AACATTTCAG TAAAAGATGC TTATGTGATT GTAAACAGAA TGGAGGGAGC AGATGAAGCC
TTGAATGAAT TAGATGTAAA AATGCATTCA ATTCTGAATA TTTTACAAAT TACAGAAGCA
TTACATGAAC AGAATCTAGT AGATGACGAG ATTTTGGAAA AAGTGAAAAA TCAAATTGCT
AAATAA
 
Protein sequence
MEFVKEFATF LHQKGIIKFG DFTLASGKKS SYYVDLRLVP SYPQEFRKMV KYLENEIAQN 
IGLDKFDSIV SVPTGGLVIA SALAIETVKP LIYVRSKPKD YGTSKSVEGK IHDGMQVVMI
DDVATTGGSV VNAIKSLKEV NISVKDAYVI VNRMEGADEA LNELDVKMHS ILNILQITEA
LHEQNLVDDE ILEKVKNQIA K