Gene Nmar_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0215 
Symbol 
ID5774565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp192117 
End bp192944 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content34% 
IMG OID641315835 
Producthypothetical protein 
Protein accessionYP_001581549 
Protein GI161527723 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAA AACCAGTTGT TGCCGGTCAA TTTTACCCTG GAACAAAAAA TGAACTTGAA 
GAAATGATTA ATTCTTGTAT TCAGCACAAA TTTGGACCTG GCAATCAAAT ACAAAATAAT
GAAGGAATTT ACGGAGTAAT TTCACCTCAT GCAGGCTATG TTTATTCGGG ACCTACGGCA
TGTTATTCTT ACAAGGCAAT TTCGTCTAAA AATCCGGAAC TAGTAATCAT TCTTGGACCT
AATCATTTTG GAGTTGGAAA AGATGTTGCT ACAATGGTTA ATGCTCAATG GGAAACACCA
CTAGGATTGG TAGATGTGGA TTCAGAGGCT GCAAAAGAGA TAGCAAATAA TTCAAAATAC
ATAGAGATTG ATGAGTTTTC TCATTCAAGA GATCATAGTC TAGAAGTTCA AATTCCTATG
TTGCAATCAA TCTTTTCTGA AAAATTCAAA ATCCTTCCAA TAATTTTACG CGATCAAAGT
TTAGAAATGG CAAAAGATGT GGGAAATGCA GTAGCACAAA TTGCAAAATC AAGAAATACA
ATGATTGTTG CATCATCTGA TTTTACACAT TATGAAGAAA ATTCTTTTGC ACATTCTCAA
GATAAAGCAT TGATTGAGCC AATATTAGAA ATGGATGTTG AAAAATTCTA TAGTGTTTTA
ATGGAAAAAA GAGTAACTGC ATGTGGTTAT GGAGCTATGG CATCAGTGAT GATTGCATGT
AAAAATTTAG GTGCGGTTAA AGGAGAATTA CTAAGTTACA CTACAAGTGG AGATGTTATG
GGAGATACAT CATCTGTTGT TGGGTATGGT GCGATTAAAT TTATTTAA
 
Protein sequence
MIRKPVVAGQ FYPGTKNELE EMINSCIQHK FGPGNQIQNN EGIYGVISPH AGYVYSGPTA 
CYSYKAISSK NPELVIILGP NHFGVGKDVA TMVNAQWETP LGLVDVDSEA AKEIANNSKY
IEIDEFSHSR DHSLEVQIPM LQSIFSEKFK ILPIILRDQS LEMAKDVGNA VAQIAKSRNT
MIVASSDFTH YEENSFAHSQ DKALIEPILE MDVEKFYSVL MEKRVTACGY GAMASVMIAC
KNLGAVKGEL LSYTTSGDVM GDTSSVVGYG AIKFI