Gene Nmar_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0201 
Symbol 
ID5773743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp180299 
End bp181180 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content32% 
IMG OID641315820 
Productradical SAM domain-containing protein 
Protein accessionYP_001581535 
Protein GI161527709 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTAA ATTATGATGC ACCACTATAC AGACCTCCTT CAGAAGCAAG GTCATTAATT 
TTTCAAGTCA CGTTAGGTTG TTCATTTAAC GAATGTTCAT TTTGTGATAT GTACAGATCA
AAAGAATATT CTGAAAGACC ATGGGATGAA GTAAAATCAG AAATTGATAT GATGGCAAAA
TATTTGCCAG ATACCAGAAG AGTTTTTCTT GCAGATGGAG ATGCATTAAA TCTTGACTCT
GAATACATGA TAAAAATTGT AAAATACATT AGAGAGAAGT TCTCAAAGAT TGAAAGAATT
TCTTGTTATG CAATGCCCAT GAATATTCTA AAGAAAACTT CTGAGGAATT AAAGAAGATG
AATGAAGCAG GTCTTGACAT GTTTTATTTG GGAATTGAGA GTGGTTCAGA TATTGTTTTA
AAAAAAGTAA CAAAAGGAGC AATTGGAAAA ACTATCATTA AATCAGTCAA CAAAGCAAAA
GATGCAGGTT ATGTTATGTC ATGTATGGTG ATTTTAGGTT TGGGAGGTAG AAAATATTCT
AAAGAACATA TCAAAGGCAC TGCTGAAGTA ATTAGTGCTT GTTCACCAAA TTATGTAGGT
GCATTAACTC TTTATTTAGA AAATGGAATA AAGCAAGAAT TTCTTGACAA GTACCAAGGG
GAATTTGTGA GAATTAATGA TGATGAATCA TTAGAAGAAT TACAAAGTTT GATTGAACAA
ATTGATACCA CAGATGAGAT TGTTTTTAGA GCAAACCATG GCTCAAATGC ATATACAATC
AAAGGTACAT TTCCTCAAGA TAAACAAGAA ATGTTAGATA AGATAGAATG GATGAAGCAA
CATCCAGAAA TTATGCGTCC TCAAGGATTA AGAGGATTCT AG
 
Protein sequence
MMLNYDAPLY RPPSEARSLI FQVTLGCSFN ECSFCDMYRS KEYSERPWDE VKSEIDMMAK 
YLPDTRRVFL ADGDALNLDS EYMIKIVKYI REKFSKIERI SCYAMPMNIL KKTSEELKKM
NEAGLDMFYL GIESGSDIVL KKVTKGAIGK TIIKSVNKAK DAGYVMSCMV ILGLGGRKYS
KEHIKGTAEV ISACSPNYVG ALTLYLENGI KQEFLDKYQG EFVRINDDES LEELQSLIEQ
IDTTDEIVFR ANHGSNAYTI KGTFPQDKQE MLDKIEWMKQ HPEIMRPQGL RGF