Gene Nmar_0172 details

Gene Information

• Locus tag: Nmar_0172
• ID: 5773824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 159978
• End bp: 160616
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641315788
• Product: hypothetical protein
• Protein accession: YP_001581506
• Protein GI: 161527680
• COG category: [R] General function prediction only
• COG ID: [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.00946712
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAGTACAG TTTCTCCACA AGCAATTGAA AATTCATTAA AACAATGTAT GGATCCTGAA 
GTTCCACTAA ATATTGTTGA GATGGGATTA ATCTATGGAA TTGATGTGGC AGAAAATAAT 
GATGTTAATA TCAAAATGAC AATGACTACT CAAGGCTGTC CTCTTCATGA AACTCTAGTT 
TCTGATGCAA CAAGATTTGT CAAAAAAGTT CCTGGAGTAA ATAATGTCAA TATTGAGATC 
GTATGGGACC CTCCCTGGTC AATGGATAAA ATGTCTGAAG AGGCAAAAAT TAAAATCAAA 
AACATGGGTG CTGGAATGAA TACTCCTGCA CCAATAAATT ATGAAACTGC ATTACCTCAA 
GGTGTTGGAA AACTAGTTCA ACAAGAGGAT GGTTCTATGG TATTAGCAAA CGAACATGAT 
CAAGGATTTA TGGTAAATCA AGCAATAGTT GATTTTTGGA AATCATGTAA TGGCCAACGT 
AAGGTTACTG ATTTGGTTGA AATTTTTGCT CAACAAACAG GACTACAAAG AAACCAAGTT 
GAAAAAGAAG TCATGCAATT ACTTCAACAA TTACGTGATG GTGGACTAAT TGCAATTGCT 
GGACAGCCAG ATGCTCCAAA TGTTGAATTT AAAAAATAA 

 

Protein sequence

MSTVSPQAIE NSLKQCMDPE VPLNIVEMGL IYGIDVAENN DVNIKMTMTT QGCPLHETLV 
SDATRFVKKV PGVNNVNIEI VWDPPWSMDK MSEEAKIKIK NMGAGMNTPA PINYETALPQ 
GVGKLVQQED GSMVLANEHD QGFMVNQAIV DFWKSCNGQR KVTDLVEIFA QQTGLQRNQV 
EKEVMQLLQQ LRDGGLIAIA GQPDAPNVEF KK