Gene Nmar_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0163 
Symbol 
ID5773861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp150648 
End bp151970 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content32% 
IMG OID641315779 
Producthypothetical protein 
Protein accessionYP_001581497 
Protein GI161527671 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000295747 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGTAA GATTTTTAGG ACAAGCTTGT ACACTAATTG AAACGAATAA TTTTAGAATA 
ATTGTTGATC CATGGATTGT TGGTCCTTGC AATGTAAACA CATGGTATAC ACTTAGAAGA
GAACCAGCTA CAAAGAAAAA CATTCCTACT GACGTTGACG CAATTTACAT TTCTCATGAA
CATGAAGATC ATTTTCAAGC AGAATCATTA TGTCAATTTG ATAAAAAAAC ACAAATCTAT
ATTTGTAATT TTCCAACAAA TAGATTTCAT AATGCTATCA AAGAATTAGG ATTTTCTAAC
ATCACTGTTC TTGACTCTTG GAAACCTGAA AAAATTAATG AGGGTTTAGA AATCACATCT
ATTAAAAACC CAGATTTGAT GTTTGAGGAT TCCGCTTTAC TTATCAAAAG CAAAGAAGGA
ACAGTTTTTT GTCAGACTGA TTGTAAAATG GATTTTGAAT CCCTTAAGAA AGTAAATGCT
GCAAAACCAG ATATTGGATT TTTCATGTAT TCTGTGGCAA ACTGGTATCC AGATGCATAT
AATTATTCAA AAGAGAAACG AGATGAAATT GCTATTAAAA GAAAAGACAA TAAAATCAAT
GGATTTGTAA ATTATGTAAA TACTATAAAA CCAAAATTTG CTATTCCGTA TGCTGGAGGC
CCATTATTTC CTCATGAATC TCAACTAAAA CTAAACTATC CCATCTCAGT TTTTGGATGT
CCTGATGAAC CAAAAAAGGC GTGGGATAAT AGTGGAAATT TAGGAACAGA AGTGGTAGCC
ATGGCAGCAG ATGATGAAAT TTCAATTGAT GGCACACACA CCAAAAATAA TAATCCAATT
TTTTCATCAG ACAAGACAGA TGTAGTAAAT GAGTTTTCAA TCCAAGTTCA AGAAGATCTT
AATAGACGAT GGAAGGAAGA AGGAGAAGCT TCACAAAAAT TATCTAATGA GATATATGAT
TATTTCAACA AAATAATCTC TGAAAACCCT GTTGCACGAA AACATATCGA TATGAAAGTT
CAACTGATTG CAGACGGTAA AAATGGAGGA GAGTATATTT TAGATATTTC TAAAGATAAG
GAATCAGGTT CTTTTGTAAC AGAAGGAAAA ACGGATGATT GGAATTATTG GATGAAAATC
CCTGCACATT TAGTTCAAAA AGCAGTTAAT AATGAACTAC TTTGGGAAAC ATTATTTTTA
TCAGCTAGGT GGCAAGGGGA TAGAAAACCT GATCAATGGA ACGAACATTT CATTAATTTG
CTATATGATC CAGATCCAAC AAGAATTAGC AATATATACA AAATCTATAA TAGATTACAT
TAA
 
Protein sequence
MFVRFLGQAC TLIETNNFRI IVDPWIVGPC NVNTWYTLRR EPATKKNIPT DVDAIYISHE 
HEDHFQAESL CQFDKKTQIY ICNFPTNRFH NAIKELGFSN ITVLDSWKPE KINEGLEITS
IKNPDLMFED SALLIKSKEG TVFCQTDCKM DFESLKKVNA AKPDIGFFMY SVANWYPDAY
NYSKEKRDEI AIKRKDNKIN GFVNYVNTIK PKFAIPYAGG PLFPHESQLK LNYPISVFGC
PDEPKKAWDN SGNLGTEVVA MAADDEISID GTHTKNNNPI FSSDKTDVVN EFSIQVQEDL
NRRWKEEGEA SQKLSNEIYD YFNKIISENP VARKHIDMKV QLIADGKNGG EYILDISKDK
ESGSFVTEGK TDDWNYWMKI PAHLVQKAVN NELLWETLFL SARWQGDRKP DQWNEHFINL
LYDPDPTRIS NIYKIYNRLH