Gene Nmar_0142 details

Gene Information

• Locus tag: Nmar_0142
• ID: 5774355
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 132142
• End bp: 132786
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 641315762
• Product: cyclase family protein
• Protein accession: YP_001581480
• Protein GI: 161527654
• COG category: [R] General function prediction only
• COG ID: [COG1878] Predicted metal-dependent hydrolase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 1
• Fosmid unclonability p-value: 0.000000000000166569
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAATGAAA TTATCGATTT GACTTATTCA ATAAATGAAA AAATGATTAC TTATCCTTCT 
CCATGGCATC CAAAAGTTTC TCTTGAACGA TTAGGTAAAA TTGAAGATGT TGGAAGAAAT 
ACTCGTAAAT TGGTTCTTGG AACCCATACA GGAACTCATA TTGATGCTCC TCTACATTTT 
ATCCCTGATG GAAATAGTAT AGAAAGTATT CCATTGGAGA AAATTACAGG TACAGTAACT 
ATTTTGGATT TTACAAACTT GAAAAATAAT CACCCAATTA CAAAAGAAGA ATTACAAGAT 
AAAAAAATCT CAAAACGATT AATTTTTAGA TTTGGTTGGC AGAAATATTG GAATACTCCT 
AATTTTTATA ATGATTATCC ATTTTTTACT GAAGATGCTG CAAATTATCT TGTTTCACAA 
GGTGTTGAAT TGATTGGTTA TGATACTCCT TCTCCTGATA AAAGTAAACA AGATGATGTA 
GACTCTCCAA TTCATAAGAT CTTTTTAAGT AATCAAATTG TTCTGTTAGA ATATTTATCA 
AATTTAGATT GTGTACAAAA TCTTGAAGGA TGGAGTATTG TTGTTGCTCC AATGAAAATA 
GATGGTTCAG ACGGTTCTCC TTCAAGAGTT TTTATTTTCA AGTAG 

 

Protein sequence

MNEIIDLTYS INEKMITYPS PWHPKVSLER LGKIEDVGRN TRKLVLGTHT GTHIDAPLHF 
IPDGNSIESI PLEKITGTVT ILDFTNLKNN HPITKEELQD KKISKRLIFR FGWQKYWNTP 
NFYNDYPFFT EDAANYLVSQ GVELIGYDTP SPDKSKQDDV DSPIHKIFLS NQIVLLEYLS 
NLDCVQNLEG WSIVVAPMKI DGSDGSPSRV FIFK